Xenopus laevis (African clawed frog): 447136
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Entry
447136 CDS
T01010
Symbol
rab40b.L, rab40, rab40b, rar, sec4l, xrab40
Name
(RefSeq) RAB40B, member RAS oncogene family L homeolog
KO
K07928
Ras-related protein Rab-40
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
447136 (rab40b.L)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xla04031
]
447136 (rab40b.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
447136 (rab40b.L)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
447136 (rab40b.L)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
447136
NCBI-ProteinID:
NP_001087313
Xenbase:
XB-GENE-865977
UniProt:
Q66KV7
A0A974BY15
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Position
9_10L:complement(50987268..51022993)
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AA seq
278 aa
AA seq
DB search
MTHRASPAKAYDFLLKFLLVGDSDVGKGEILASLQDGSTESPYGYNMGIDYKTTTILLDG
RRIKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAFKRQVSTDQAQNFAERLGMTFFEVSPLCNFNITESFTELARIVLMRHGM
DRLWRPNKVLSLQDLCCRAIVSCTPVHLVDKLPLPVALRSHLKSFSMANGLNARMMHGRS
YSLTANNTNKRNSLKKAKIIRPPQSPPKNCTRNSCKIS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagagccagcccagcgaaagcctatgacttccttctgaagttccttttggtt
ggggatagtgatgttggcaaaggagagatactggcaagcttgcaggatggatccacagag
tcgccttatggttacaatatggggatcgactacaagacaaccacaatattactggatggt
cgtcggataaagttacagctctgggacacgtcggggcagggaaggttctgcacaatattt
cgctcctattcgaggggtgctcagggtgtaattctggtgtatgacatcacaaaccgctgg
tcgtttgacgggatagatcggtggattaaagagatagatgagcatgctcctggggtgccc
aaaatcctggtggggaaccggcttcatttggcctttaaacggcaggtgtcaacagaccaa
gcacaaaacttcgctgagcggctcggcatgacattcttcgaggtcagccccctgtgtaac
ttcaatatcacggagtcgttcactgaactggcacggatagttctaatgagacatgggatg
gaccgactttggaggcccaacaaggtactgagtttacaagacctctgctgccgagccatt
gtatcctgcaccccagtgcacctcgtggacaagcttcctctccctgttgccttaagaagc
catttaaaatcgttttccatggccaatggtttgaacgccagaatgatgcatggtcgctcc
tactcgctgactgccaacaacacaaacaagaggaacagcctcaaaaaagccaagatcatc
cgtccccctcaaagccccccaaaaaactgtaccagaaacagctgcaaaatctcctag
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