Xenopus laevis (African clawed frog): 447200
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Entry
447200 CDS
T01010
Symbol
rnf115.S, rnf115
Name
(RefSeq) ring finger protein 115 S homeolog
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
447200 (rnf115.S)
04121 Ubiquitin system [BR:
xla04121
]
447200 (rnf115.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
447200 (rnf115.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
447200 (rnf115.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
447200 (rnf115.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
Zn_ribbon_19
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
HypA
zf-ANAPC11
DUF8608
zf-Nse
C1_2
DZR_2
DZR
FAR1_N
CoiA_N
Rad50_zn_hook
VPS18_RING_C
DUF7560
Motif
Other DBs
NCBI-GeneID:
447200
NCBI-ProteinID:
NP_001087376
Xenbase:
XB-GENE-993234
UniProt:
Q6AXA5
A0A974H6S4
LinkDB
All DBs
Position
8S:complement(101178588..101194961)
Genome browser
AA seq
295 aa
AA seq
DB search
MAEAAAVSQHRFFCHHCKGEVNPKLPEYICPRCDSGFIEEVTEESSFLDSGGSSLDDSSP
AQFTELWDHLDQAMFIPDFRHFLSASSSLDQDGRDQERGHQAHTELRLTRRPPRQPMTRY
RSRVSSRPDRSPAIEGIIQQIFAGVFANPPFPGSPHPLSWSGMLHSNPGDYAWGQSGLDS
IVTQLLGQLENSGPPPADKDKIVSLPTVTVTREQVAMGLECPVCKEDYTVEEQVRQLPCN
HFFHGDCIVPWLELHDTCPVCRKSLNGEDSTRQAPNSEATGSNNFSSHSPDRWTF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcggcggtgtctcagcatcggttcttctgtcatcactgtaagggcgag
gtcaaccccaaactgccggagtatatttgccccagatgcgactccggtttcattgaagag
gtgacagaagaatccagtttcctagattctggtggaagttccctcgatgacagttccccc
gcgcagtttacagagctctgggaccatttagatcaagcgatgttcatccctgacttccgg
catttcctaagcgccagcagttctttagatcaagatggcagagaccaggaacggggccac
caggcccatacagagctcagactgacgcgcagacctcccaggcagccaatgacgaggtat
agatctcgggtcagttcacgccctgaccggtcaccggccattgaaggcatcatccaacag
atctttgccggagtattcgcaaacccaccctttccagggtccccgcatcccctctcttgg
agtgggatgttacactcgaatcctggagactacgcctggggacagagcggcctggattcc
attgtcacacagctattgggtcagcttgagaacagtggtcctcctccagccgacaaagac
aagattgtgtctctcccaactgtcaccgttacccgagagcaagtggcgatgggcctcgag
tgcccggtgtgcaaagaggattacaccgtagaagaacaagtaaggcagttaccctgcaac
catttcttccacggagactgcatcgtgccttggcttgaactgcatgacacatgccccgtt
tgcagaaagagtctgaatggtgaggactcgacgagacaagctcccaattcagaggcgact
ggtagtaacaacttcagtagccacagccccgaccgatggaccttctga
DBGET
integrated database retrieval system
