Xenopus laevis (African clawed frog): 447214
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Entry
447214 CDS
T01010
Symbol
cdhr5.S, cdhr5, mu-pcdh, mucdhl, mupcdh
Name
(RefSeq) cadherin related family member 5 S homeolog precursor
KO
K16505
cadherin-related family member 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
447214 (cdhr5.S)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Cadherin related
447214 (cdhr5.S)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
447214
NCBI-ProteinID:
NP_001087390
Xenbase:
XB-GENE-6254149
UniProt:
Q6AX88
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Position
4S:3238556..3266702
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AA seq
841 aa
AA seq
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MSRRGAFVDIVALLKMGSILALFLLLFIPIGCLAQGCQVANERVEIKENNPVGYVVTTIV
IDPDYIMTVFDNTEWFEIKGTELLLKKSLDYEVETTLDVSLHCIRNGITEKTTRVYVTVL
NLNDNAPTFKQSAYNFTVPEDAKVGNSIGHEITADDLDLDTIFYKLSGPIQAATDHFRLS
SVNNPIILVNQSLDYDNYNYTQLILTARDTQGEGVNGSHTATATINIEISDVDNKPPLFL
PCRKVGVICINDGYTTNVTRSEKVTGALDLKPAPLYAIDGDTGINAPIEYSIVTENTGGI
FAVDSASGNITMTRAADNLGIILLQIMAAQADDLLKYATTTVQIEVVEKNNHPPTFEKKN
YLGTIPAHSAIGTLVTDSSSPNRPLQVFAADGDFTDRINPFLTYAINGTTDFTVSRDGYI
KNNALFSSPATIRFSVLAEDTTTGEKDSTDVVVEITPSVAPTTVTTTTTLGPGTTTTSGT
GPTTTKSPGTGTTATTTPGTGTTTTTTSGTGPTTTKYPGTGTTATTTPGTGTTTTTTSGT
GPTTTKYPGTGTTATTTPGTGTTTTTTSGTGPTTTKSPGTGPTTTTTPGTGTTTTTTSGT
GPTTTKSPGTGPTTTTTPGTEGDKVPGGGYSATDMAALGATLGVILALCLAGLGFLIHKH
YGDQIRNKMSKSSGDNFGGSEDRTEQLIDDDDDADDPNSGSAEVMPTSISYGVENTVSKD
PFVPDLVLGASTANVFANAEPSNVPHAEKPEEGSDPDDKKEVKSILTKEFKEDPGYKSVW
FREDATPEVVVIQGVEEGEADDGETEEGYNQDDDDDDEDQLSPNFLGMNNDNNYSDNFSQ
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggagaggagcatttgtggatattgtggcgctgctgaaaatggggtcgattttg
gccctgtttctactgctcttcattccaataggatgtttggcacaaggatgtcaggtagcc
aatgaaagagtggagattaaggaaaacaaccctgtgggttacgtagtgacaacaatagtc
atagaccctgattatatcatgacggtcttcgacaacactgaatggttcgagattaaaggc
acagagttgctactgaagaaatcccttgattatgaggttgaaacaacactcgatgtttct
ctccattgtattaggaatggcataacggagaagacaacgagggtttatgtcacagtgcta
aatctcaacgacaacgctccaacgttcaagcaaagcgcatacaacttcaccgtcccggag
gatgccaaggtgggcaattccattgggcatgagataacagcagacgaccttgatctggac
acgatcttttataaactgtcaggaccaattcaggctgcaacagatcattttaggctcagc
tctgtcaataaccctattattttggtgaaccagtccctggattatgacaattacaattac
acacagctaatcctgactgcccgggatactcaaggtgagggagtgaatggttcacacacg
gccactgcaactataaatatagaaatatcggatgtggataacaaaccaccactatttctg
ccctgtcggaaagttggagtcatctgcatcaatgatggatacacaactaatgtaacacga
tcagaaaaagtgacaggggcactggatttaaaaccagctccattatatgcaatagatgga
gataccggcattaatgctcccattgagtattccattgttactgagaataccggaggaata
tttgctgtggatagtgcgagtggaaatataacgatgaccagagcagcagataatttgggg
ataatattgttgcagattatggctgcccaagctgatgatttgctgaaatatgcaacgacc
acggtgcagattgaagttgtggaaaaaaacaaccatcctccaacgtttgaaaagaaaaat
tacttaggaacaatcccggctcactctgccattggcacattagttaccgattccagtagc
cccaacagacccctacaagtgttcgctgcggatggagattttacagataggattaatcca
tttttaacatatgcaatcaatggcacaactgatttcacagtgtcccgggatggatatata
aaaaataatgctttatttagttctccggctacaataagattttctgtattggcagaagac
accacaactggagaaaaggactccactgatgtcgtagtagaaatcactccgagtgtagca
cccacaacagttactacaactacaactctgggaccaggtaccactacaacatctggaaca
ggccccactactacaaaatctccaggaacaggtacaactgccactacaactcctggaaca
ggaaccactacaactacaacatctggaacaggccccaccactactaaatatccaggaaca
ggtacaactgccactacaactcctggaacaggaaccactacaactacaacatctggaaca
ggccccaccactactaaatacccaggaacaggtacaactgccactacaactcctggaaca
ggaaccactacaactacaacatctggaacaggccccactactactaaatctcctggaaca
ggccccactacaactacaactcctggaacaggaaccactacaactacaacatctggaaca
ggccccactactactaaatctcctggaacaggccccactacaactacaactcctggaaca
gaaggagataaggtaccaggaggtggttacagtgccacagatatggccgccctgggagcc
accctgggagtgattctggccttgtgcttagctggacttggattcctcatccataagcat
tacggagaccaaataagaaacaagatgagcaaaagctctggcgataactttggaggttct
gaagacaggactgaacagctcatagatgatgatgatgatgcagatgatcctaattctggt
tcggctgaagtaatgcctaccagtatcagttatggtgttgagaataccgtttccaaagat
ccatttgtaccagatttagttttaggggcctctactgcaaatgtatttgcaaacgcggag
ccatcaaatgttcctcatgccgagaagccagaagaaggctctgacccagatgacaagaaa
gaagtgaaatccatcctcacaaaggagtttaaggaagatccaggatataaatctgtgtgg
tttagggaagatgccacaccagaggttgtagtgattcagggggtcgaggaaggagaagct
gatgatggtgaaactgaggaaggatataaccaagatgatgatgatgatgatgaagaccaa
ctaagccccaacttccttggaatgaacaatgataataattactctgataatttctcccaa
ctttaa
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