Xenopus laevis (African clawed frog): 447229
Help
Entry
447229 CDS
T01010
Symbol
rapgef2.L, rapgef2
Name
(RefSeq) Rap guanine nucleotide exchange factor 2 L homeolog
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
447229 (rapgef2.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
447229 (rapgef2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
447229
NCBI-ProteinID:
NP_001087405
Xenbase:
XB-GENE-6254145
UniProt:
Q6AX68
LinkDB
All DBs
Position
1L:complement(55839963..56042512)
Genome browser
AA seq
1420 aa
AA seq
DB search
MDLSGLPETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQ
LPAFANMTMSVRRELCAVMVFAVVERAGTVVLNDGEELDSWSVILNGSVEVTYPDGRTEI
LCMGNSFGVSPTMEKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIV
MVKEHRELDRTGTRKGHIVIKGTSERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMEV
GKKLLEWFNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRL
LNIACAAKAKRRLITLTKPSREAPLPFNLLGGSDKGFGIFVDSVDPGSKAAETGLKRGDQ
ILEVNGQNFENIQLTKALEILKNNTHFSLTVKTNLFVFKELLVRMLEEKRNSAPHLPKIG
DIKKASRYSIPDLAVDVEQVIGLEKVSKKGKANTVGGRNKLKKILDKTRISILPQKPYND
IGIGQSQDDSIVGLRQTKHMPATLPVSGTLSSSNPDLLQSHHRILDFNTTPDQPDQVLRV
FKADQQSRYIMISKDTTAKEVVIQAIREFALTAVADAYSLCEVSVTPEGVIKQRRLPDQL
SKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLRESQISLLQLSTIEVATQLSMRNFEL
FRNIEPTEYIDDLFKLKMKSGCANLKNFEEVINQETFWVASEILRETNQLKRMKIIKHFI
KIALHCRECKNFNSMFAIISGLNLAPVSRLRATWEKLPSKYEKLFQDLQDLFDPSRNMAK
YRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMAS
VNMDPAVMFRTRKKKWRSLGSLSQGSTNAAVLDVAQSGGHKKRVRRSSFLNAKKLYEDAQ
MARKVKQYLSDLDLEMDEENLQTLSVQCEPATNTLPKNPCEKRSGKPDTSPVAPRAAAQH
KQQQQQQQQTKVNQALQVPVVALYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLER
HKKQAEDSVSNASSQLSSPPTSPQCSPRKGYTLAASGTVDNFSDSGHSEISSRSSIVSNS
SFDCVHLHDDRRQRHSLSMVETNLGVGRADRRAIIDADQCSLGSYVPVAETRGLYAGATV
LSSPSMEELSQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIPHQRSWETLPFGHVHFD
HTADGSGFWATGGHMDHGIFPDHSTKYGRYSQGREPLDQAQSRASWASSTGYWGEDSEGD
TGTIKRRGGKDVALEAETSSITSMAPEETRPLPVPTHVAVTTSSAKGLIARNEGRYREPP
PTPPGYVGIPIADFAEGHPTLSRKPPDYNVALQRSRMMARRSESEGSAATSPPSHNQPSG
RTANKPQWHKPNEADPRLALYQAQGVTAKDDADDEQVSAV
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagtgggctaccagagactgctgttgattcagaagatgatgacgatgaagag
gatattgaaagagcctctgaccctttaatgagcagggacatagtcagagactgtctggag
aaggatccaattgacaggactgacgacgatattgaacaactcctggagttcatgcaccag
ctgcctgcatttgccaacatgacaatgtctgtaagacgagagctctgtgcagtcatggtg
tttgccgtggtcgagcgggcaggaactgttgtactaaacgatggggaggagctcgattcc
tggtcggttattttaaatggctcagtagaagtgacatatcctgatggcaggacagaaata
ctgtgcatggggaacagctttggtgtgtcgccaaccatggagaaggaatacatgaaggga
gtgatgagaaccaaagtggatgactgccagtttgtatgcatcgcccagcaagattactgc
cgcatcctcaaccaggtggaaaagaacatgcagaaggtggaagaggagggcgagattgtg
atggtgaaagagcacagagagcttgatcgcactggaaccaggaaaggtcacattgtcatc
aagggaacttcggagcgtctaaccatgcatctagtggaagaacattctgtggttgaccca
acatatattgaagatttcctcctcacctacagaacttttctttctagccctatggaagtg
ggaaagaaactactggagtggtttaatgaccctagtctcagggacaaggttacccgagta
gtgttgctatgggtaaacaatcactttaatgactttgaaggggacccagccatgactaga
tttttagaagaatttgagaataatttggaacgtgagaaaatgggtggccacctaaggctg
ttaaatattgcatgtgctgccaaagcaaaaagaagattgataactctaacaaagccctcc
cgagaagcccccttgccttttaacctgctaggagggtcagacaagggatttggaatcttt
gtagacagcgtggatccaggaagcaaagcagctgagactggcttgaagagaggggatcag
attttggaggtaaatgggcagaactttgaaaacattcaacttaccaaggctttggaaatc
ctaaagaacaatactcacttttccctcactgtgaaaaccaatttatttgtgtttaaggag
cttctggtcagaatgttagaggaaaagaggaatagtgccccgcacttgcccaaaattgga
gacattaaaaaagccagccgatattcaattccagatcttgcagttgacgttgaacaagtt
attggacttgaaaaagtgagcaaaaagggcaaagccaatactgtcggaggacgaaacaag
ctgaaaaagatccttgacaagacgcgcatcagtatcttgcctcaaaagccttacaatgat
attggaatcggtcagtctcaagatgacagcattgtgggtctccgtcagacaaagcacatg
ccagctacactgcctgtcagtgggacactatcttccagcaatcctgatttactgcagtcc
catcaccgcatcctagactttaataccacaccagatcaaccagaccaggtgctgagagtt
ttcaaggctgatcagcagagccgctacataatgatcagcaaggacaccactgctaaggaa
gtggtcatccaggcaattcgagaatttgcattaactgccgtagctgacgcctactccttg
tgtgaagtgtctgtcacccctgaaggtgtcatcaaacaacgacggcttcctgatcagctt
tccaagctggccgacagaatacaactcagcggaaggtattacctaaaaagcaacatggaa
actgaaacactctgctctgatgaagatgcccaagaccttctaagggagagtcagatctct
ttgctgcagctcagcaccattgaagtggcaacccagctgtctatgagaaactttgagcta
tttcggaacattgagcccacagagtacatcgatgacttgttcaaactgaaaatgaaatct
ggctgcgccaacctcaaaaactttgaagaagtcattaaccaagagaccttctgggtggcc
tcggaaattctaagggaaacgaaccagctgaaacggatgaagatcatcaagcattttatc
aagatcgcactacattgtagagagtgcaagaacttcaactccatgtttgcaatcattagt
ggcttaaatttggcaccagtttcacgacttcgagcaacttgggaaaaactcccaagtaaa
tatgagaagctctttcaagacctccaggacctgtttgacccttccagaaacatggctaaa
tatcggaatgtgctgaatagtcagaacctccagccccccattatacctttgtttcctgtc
attaagaaagacctcaccttccttcatgagggcaatgactccaaagtagatggattagtt
aatttcgagaagcttaggatgattgcaaaagaaatccgtcatgtgggaagaatggcttct
gtgaatatggatccagctgtcatgttccgaaccaggaagaagaagtggaggagtttgggg
tctctcagtcaaggcagcaccaatgctgcagtactcgatgtagcacagtcgggggggcac
aaaaaacgtgtgcgtcgcagctctttccttaatgccaagaaactttatgaagatgcccag
atggctcgcaaggtgaagcaatacttatccgatctggatcttgaaatggatgaagagaat
cttcagacactttctgtacagtgtgaaccagcaacaaatacattgccaaaaaatccatgt
gagaagagatcaggaaagccagatacatcgcctgtggcaccaagggcagcagcgcagcac
aaacaacaacagcagcagcagcagcaaacgaaggtgaaccaggcattgcaagtccctgtt
gtggctctttacccaagtcgtaagaaagtgcctgtcaaggatcttccaccgtttgggatc
aactctccccaagctttaaagaaaattctttcgttatcagaagaaggaagtttggaaagg
cacaagaagcaagcagaggactccgtatcaaatgcatcctctcagctttcatcccctcca
acttccccgcagtgctctcccagaaaaggttacacattggcagctagtggcacagtggat
aacttctctgactcgggacacagtgaaatctcctcccgctccagcatcgtcagtaactcc
tcctttgactgcgtgcacttgcatgatgatcggaggcagaggcactcattgagcatggtg
gagactaatctgggtgtgggaagggctgacagaagagccattatagatgcagatcagtgc
agcctaggctcttatgtgccggtggcagagactcgaggcctctatgcaggtgcaacagtt
ctgtcctcccccagcatggaggagctctcccaggatcagggggatcgagcttctttagat
gcagctgatagtggccgtggaagctggacttcatgctcaagcggatcccatgataatata
caaactattcctcatcaaagaagctgggagactcttccatttggtcatgttcattttgat
cacacagctgatgggtcaggcttctgggccacaggtggccacatggaccacggtattttt
cctgatcatagcacaaaatacggcagatacagccaaggaagagaacctttggatcaagca
cagtcaagagccagctgggcatcatcgacaggctactggggcgaggactcagaaggtgat
accggcaccattaagagaagaggtggaaaagatgtggcccttgaagctgaaaccagcagt
ataacgtcaatggctccagaagaaacaaggcctctccctgtccccacacatgtagctgtg
actacaagttctgcaaaagggcttattgcaaggaacgaaggccgatacagagaaccaccg
ccgacccctccaggctatgtaggaatccctatagctgactttgctgaaggacaccctact
ctatccagaaagccaccagattacaatgtggccttgcagcgttccagaatgatggctcgg
agaagtgaaagtgaagggtcagcagcaacttctccaccttcacataatcagccttctggc
aggactgcaaacaaaccccagtggcataaaccaaatgaggctgacccaaggcttgctctc
tatcaggcacaaggggttacagcaaaggatgatgcagacgacgagcaagtttccgccgtc
taa
DBGET
integrated database retrieval system
