Xenopus laevis (African clawed frog): 447241
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Entry
447241 CDS
T01010
Symbol
atg4d.L
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
447241 (atg4d.L)
04136 Autophagy - other
447241 (atg4d.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
447241 (atg4d.L)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
447241 (atg4d.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
447241 (atg4d.L)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
447241 (atg4d.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
447241 (atg4d.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
447241 (atg4d.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
447241
NCBI-ProteinID:
XP_041443161
Xenbase:
XB-GENE-1016723
UniProt:
A0A8J1MNZ9
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All DBs
Position
3L:147651069..147666368
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AA seq
478 aa
AA seq
DB search
MNSVSPLATQYGSPKGSQQMENRSTQSGGHEQRKMGHQDATPDGEADEVDKLKSKLLSAW
NNVKYGWSVKMKTTFSRSAPVYLLGERYFFRLDDEIERFQKDFVSRVWLTYRRDFPALEG
TALTTDCGWGCMIRSGQMLLAQGLLLHLLSREWTHGQYRLITVTLXVGNGTPISTLAVPP
SMPLSSLATGHSAGDYQPRTQCSGAPHGDQVHRNIMRWFSDHPGSPFGLHQLVTLGSIFG
KKAGDWYGPSIVAHIIKKAIETSSEVPELSVYVSQDCTVYKADIEQLFAGDVPHAETSRG
AGKAVIILVPVRLGGETFNPVYKHCLKEVLAELPSCFGHLIGGKTXNNSRSMFIGYKDSY
LLYLDPHYCQPYIDTSKNDFPLESFHCNSPRKISITRMDPSCTFAFYAKNSEDFGKLCDH
LMKVLHSPRAEEKYPIFSISEGQAQEYAEGPQSSSHPPVCRKKGPLVKRPSSDEFEFL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgtgtcccctctggccacacagtatggaagccccaaaggttcacagcagatg
gagaaccgcagcacccagagtgggggccatgagcagagaaagatgggccaccaagatgcc
actccagacggagaagctgacgaagtggataaactcaagagcaaactgctgtccgcttgg
aacaatgtcaagtatgggtggtcagtgaaaatgaaaaccactttcagccgctctgcacct
gtgtatttgctgggggaacgttacttcttcaggctggatgatgaaattgagcggtttcag
aaggattttgtgtcccgggtgtggctgacgtatagacgcgattttcctgcacttgagggc
acagcactcactacagactgtggctggggctgcatgatcaggagtggccagatgttattg
gcacaaggtctgctcctgcacctgctttcccgagaatggacgcatggtcagtataggctt
ataaccgtaacactttgagtaggaaatggaaccccgatctcgactcttgcagttccaccc
agcatgcccctctcctccttggccacaggccattcagcgggtgactatcagccccgcact
caatgttcaggagcccctcatggagatcaagtccatcggaatataatgcgctggttctca
gatcatccaggctccccttttgggctgcaccagttggtgacattaggaagcatctttggc
aagaaagcaggagactggtatggccccagtattgtggctcacattataaaaaaagcaata
gaaacctcgagtgaagtcccagaactgtcagtttatgtgtctcaggattgcacagtgtat
aaggcagatattgagcagctctttgctggagacgttccacacgcggagaccagcaggggt
gctgggaaggctgtcattatcctggtgcctgtgcgtctgggcggagaaaccttcaaccca
gtttataaacactgtctcaaggaagttctggcggaattgccatcctgttttgggcatcta
attggaggaaaaacctaaaacaactcacgctctatgtttattggatacaaggatagttac
ctgttgtacctggatccacattactgtcagccgtacattgatacgagtaagaatgacttc
ccattagagtctttccactgtaactctcctcgcaaaatctccatcaccagaatggatccc
agttgcacctttgctttctatgccaaaaacagcgaagactttggtaaactctgcgaccat
ctaatgaaggtgctgcactccccccgtgccgaggagaaatatcccatcttcagtatctca
gaaggacaagctcaggaatacgctgaagggccgcagagctcctctcacccccctgtgtgt
cgcaagaaagggccgctagtgaagagacccagctcagatgagtttgaattcttataa
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