Xenopus laevis (African clawed frog): 447264
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Entry
447264 CDS
T01010
Symbol
nup85.L, nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
447264 (nup85.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
447264 (nup85.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
447264 (nup85.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
447264 (nup85.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
447264 (nup85.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Terpene_syn_C_2
Motif
Other DBs
NCBI-GeneID:
447264
NCBI-ProteinID:
NP_001087440
Xenbase:
XB-GENE-1008056
UniProt:
Q68FJ0
Structure
PDB
PDBj
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All DBs
Position
9_10L:complement(46875023..46887331)
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AA seq
653 aa
AA seq
DB search
MEELDVDPAETPIPGLGQQNRHIGFSWGPGDLLLYETLYQKQGNSETAARCPFMYLVRSD
EDIYSPVLRKLFNESHSIFVGLQKSAEEASGKSRKAQLVQVSRNYRSVLRACMEEMHTLS
ESTRETAQKYISQISILSAMELSWNLCEILFIESAPAGPLLILLLEWVRLHVCEVDNIVQ
DVLRSEKPTEHEKFWDGVTGYVLQGRMNEARQLLAKEASTSASARSMCRVLDDLLKKMPM
LHTGGTQTLTEFELKWQHWREECERHLQNGTFSSNVHMEAVCRVLLGDEEVLLEKRDLMT
TWYHFLVSRLLFKHPTVKPTELHFYAQSSLDMFLAGDSCPEPLDNILLAAFEFDIHQVIK
EFSIVSSNWWFVAHLTDLLDHCQLFQAHNLYFGANMREFLLLDYASGLFSHHSLWQLGVD
YFDYCPNLGREYLKLHMERIPLSTEKKALKALRICEQRQMTEQVRSICKTMAMQSLCNRR
LGSALSWSIRAKDAAFATLISDRFLKEYCERGNFTDLDLIDNLGSAMLLSDRLTFLGKYR
EFHRMYSQEQFSEAASLLLSLMTARIAPCSFWLTLLLDALPLLEQKQVIFSAEQTYELMR
CLEDRMAAKLESTSPDEIQKQDSSIDNTKVEMLRLALARNLARAIVTEGALQE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttggatgttgatccggcagagactcccattccaggtttagggcaacaaaac
cggcacatagggttcagctggggacctggcgatttacttctgtatgaaacgctttaccag
aaacaaggtaacagtgaaacagcggctcgctgccctttcatgtaccttgtgcgcagcgat
gaggatatctactcccctgtactgcgcaagctcttcaatgagtcgcacagcatctttgtt
ggacttcagaagagtgcagaggaagcctcaggcaaatcccgaaaagcacagttggtacag
gtcagtagaaattatcgctcagtgcttagagcctgcatggaggagatgcacacactatct
gagtctaccagagagaccgctcagaagtacattagccagatatccatcttatctgccatg
gagctaagctggaatctctgtgagattctcttcatagaatctgctccagctggccccctc
ttgattcttctgcttgagtgggtacgtcttcatgtgtgtgaagtggacaatattgttcaa
gatgttctcagaagtgaaaagcctacagaacacgagaagttttgggatggggttactggg
tatgtgctgcaaggaaggatgaacgaggcaaggcagttgctggctaaggaagcatcaaca
tctgcgagcgccagaagcatgtgcagggtgctggatgaccttcttaagaaaatgcccatg
cttcatacgggtggaacacagaccctgaccgagtttgagttgaaatggcagcactggcgg
gaggaatgtgagcgtcacctgcagaacggaacattctcttccaatgtgcacatggaagct
gtttgcagggtcctgttgggagacgaggaagtattattagaaaagagggacctaatgaca
acatggtatcactttctggtgtcacgtctgcttttcaaacacccaacagtgaaacccaca
gagttgcacttctatgcacagtctagcttagatatgttcctggctggagacagctgccca
gagccactggataacattttgctggcagcatttgagtttgacattcatcaggttatcaaa
gagtttagcattgtttccagtaactggtggtttgtagctcatctgactgacctgttggat
cattgccagttattccaggctcacaacctttatttcggggccaacatgcgtgaatttctt
ctgctagattacgcctctggccttttctcccatcacagcctctggcaacttggtgttgac
tactttgactactgccctaatctaggtcgtgagtaccttaagcttcacatggaacgcatc
cctttgagcacagaaaagaaagccctgaaggctctacgcatctgtgagcagcgacaaatg
acagaacaagtacgtagcatttgcaagacgatggccatgcagtctctgtgcaataggcgc
ctaggatcagcattgtcctggagcattcgggccaaagatgcagcatttgcgacacttatc
tcagaccggttcctgaaagaatactgtgaaagaggaaactttacagacttggacctaatc
gataatctgggctctgctatgttgctaagtgaccgcttgactttccttggaaaatatagg
gaatttcaccggatgtacagccaggagcagttttccgaagctgctagtttgcttctctca
ctaatgactgctcgaattgctccgtgctctttctggcttaccctcctgttggatgctctg
ccccttcttgaacagaaacaggttatattttccgccgagcagacttatgaattgatgcgg
tgccttgaggacaggatggcagcaaagcttgaatctacatcaccagatgaaatacaaaaa
caggattccagcattgacaataccaaagttgaaatgttgcggctggctctggcccggaac
ctggcacgagcaatcgtaacagagggggcactgcaagaatag
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