Xenopus laevis (African clawed frog): 447385
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Entry
447385 CDS
T01010
Symbol
tia1.L, tia-1, tia1
Name
(RefSeq) TIA1 cytotoxic granule-associated RNA binding protein L homeolog
KO
K13201
nucleolysin TIA-1/TIAR
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
447385 (tia1.L)
03041 Spliceosome [BR:
xla03041
]
447385 (tia1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
447385 (tia1.L)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
447385 (tia1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
DUF1866
RRM_3
Flg_new_2
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
447385
NCBI-ProteinID:
NP_001087561
Xenbase:
XB-GENE-1002882
UniProt:
Q68EU5
A0A974DD83
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All DBs
Position
3L:complement(129368011..129390556)
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AA seq
389 aa
AA seq
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MEEELPRTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAA
ASLAAINGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTD
DIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNAKQLTYEEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMLNPVQQVSEP
SQISFPPPYGQWGQWYGGAQQISQYVPNGWQMPAYGVYGQAWNQQGYSQTPSSAATWVGP
NYGVQPQPGQNGTLITNQTGYRMAGYQTQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaattacccagaacgctgtatgtgggaaatctctctagggatgtgacagaa
cccttgattcttcaggtgttcagccaacttggtccatgcaaaagctgcaaaatgatcatg
gataccgctggaaatgatccctactgctttgtggagttctttgagcacagacatgcagct
gcatcattagcagctatcaatggtcgaaagataatgggcaaggaagtaaaggtcaactgg
gccactacaccaagcagccagaaaaaagatgcaaatagtagttccgttgtcagcacactg
cgttctcaagatcatttccatgtctttgttggtgacctgagcccagaaatcacaactgat
gatataaaagcagcatttgcaccatttgggagaatatcagatgcccgtgtggttaaagat
atgacaactggaaaatctaaggggtacggatttgtgtccttctttaataaatgggatgcc
gaaaatgccattgcacaaatgggaggacagtggcttggtggccgacagattagaactaac
tgggccacaagaaaacctccagcgccaaagagcacctatgaatccaacgcaaagcagttg
acctatgaggaagttgtcaaccagtcaagtcccagcaattgtactgtgtactgtggtggt
gtcacaagtgggctaacagaacaactcatgcggcaaaccttttcaccttttggtcaaata
atggaagtcagagtctttccagataaaggctactcctttgtacggtttagttcccacgaa
agtgcagctcatgctatcgtcagtgtcaatggaactactattgaggggcatgtggtgaag
tgttactggggaaaggagactccagatatgctgaatcctgttcagcaggtaagtgagcca
agccaaattagctttcccccaccatatgggcagtggggtcagtggtatggcggggctcaa
caaataagccagtatgtgcccaatggatggcaaatgccagcatatggggtctatggacag
gcatggaatcagcaaggatatagtcaaactccatcatctgccgcaacatgggtgggacca
aattacggggtgcaacctcagcctgggcaaaacgggactctgatcacaaaccaaactggc
taccggatggctggataccaaacacaatga
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