Xenopus laevis (African clawed frog): 447466
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Entry
447466 CDS
T01010
Symbol
tfip11.L, stip, tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
447466 (tfip11.L)
Spliceosome [BR:
xla03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
447466 (tfip11.L)
Other components
Complex C specific factors
447466 (tfip11.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
447466
NCBI-ProteinID:
NP_001087642
Xenbase:
XB-GENE-984527
UniProt:
Q66J74
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Position
4L:11252745..11269157
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AA seq
824 aa
AA seq
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MSMSHLYGKDEDSDGVEMENFEITDWDLQNEFNPNRRKHFQTKEEATYGMWAEHDSDDER
PSFGGKRSRDYSAPVNFISAGIRKPAAEEKSDSDSDSETQSRRENFPKDFEAKKLRTGGN
FKPSQRTFAGGIKSNTDFGSWERHTKGIGQKLLQKMGYMPGRGLGKNAQGIIAPIEAKQR
KGKGAVGAYGSERTKQSIKDFPVVDSEEEEEKDFQKEMSQWRKEPGGGKKKPKYSYKTVE
ELKAKGRVGKSLSAPQKEISQVKVIDMTGREQKVYYSYSQLAQKHNIPGEAPGQGVKEEK
PQGFALPELEHNLQLLIDMTEQEIIQNDRQLQYEQDMVVNLTHELEKLSEVLEREDKAIE
NLSKVLETVEECERRIQPTCDNPLTLEECARIFEMLQDKYYEEYKMSEKADLSVAIVYPL
MKDYFKDWNPLRDPNYGTDVMSKWKNLLEEGHLSHSAHDAAMDPYHRLLWEMWVPFLRNI
IAQWQPRNCAPMADFLDSWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWI
HPWLPMMQSRLEPLFSPIRNKLSNALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVKNI
VPKLGMCLSEFVINPHQQHMEVFHWVTDWEGMVALSSIVGLLEKHFFPKWLQVLCSWLSN
NPNYEEITKWYLGWKSMFSDLVLAHPAIKDKFNEALDIMNRAVSSSVGAYMQPGARESIA
YLTQTEKRKDFQYEAMQERRDAESIAQRGIGAAAAVPMNFKDLIQSKAEEHNIVFMPLIG
KRHEGKQLYNFNRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcacacctttatggcaaagatgaggacagcgatggagtggagatggagaac
tttgagatcacagactgggacctgcagaacgagtttaaccccaaccgcagaaagcatttc
cagacaaaagaggaggcgacctacggcatgtgggcagagcacgactctgatgatgagagg
ccaagctttggggggaaaagatcccgagactactctgcccctgttaattttatcagcgct
ggaatccgtaagccagctgcagaagaaaaatctgatagtgattctgacagtgaaacacaa
tcaagaagggaaaatttcccaaaggattttgaagcaaagaagctaaggacgggtggtaat
tttaaaccatcacagaggacgtttgctggaggaataaagtcaaacacagattttggttct
tgggagcggcatacgaaaggaattgggcagaagctcctacagaagatgggttacatgcca
gggagaggcttgggaaagaatgctcaaggcatcattgcccccattgaagccaaacaaagg
aaaggtaaaggagcagtaggggcttatggctcagaaaggaccaagcagtcgattaaggat
ttccctgttgtggattctgaagaagaggaggagaaggattttcagaaggagatgagtcaa
tggcgtaaggagcctggcggagggaagaaaaaacctaaatactcctataaaaccgtggag
gagctgaaagccaaaggcagagtggggaagtctttgtcggcaccccaaaaggagatatcc
caagtaaaggtgattgatatgactggtcgggagcagaaggtctactacagttacagtcaa
cttgcccagaagcacaacattcctggagaggcgcctggtcagggggtcaaggaagagaag
cctcagggttttgctctgccagagctggagcacaacttgcagctactaattgatatgact
gagcaggagatcattcagaatgaccggcaactacagtatgagcaggacatggtggtgaac
ctcacccacgagctggagaagctttctgaggtgctggaacgggaggataaagccatagag
aacctgagtaaggttctggagactgtagaggagtgtgaacgtcggatacagcctacgtgt
gataaccctctgacattagaggagtgtgcacggatatttgagatgttgcaagacaaatac
tatgaggaatacaagatgtctgagaaggcagacctttctgtggctattgtttacccactg
atgaaagattatttcaaagactggaacccacttagggatcctaattatgggactgatgtc
atgagtaagtggaagaaccttctagaggaaggtcacctatctcacagtgcgcacgatgca
gctatggacccatatcacaggttgctctgggagatgtgggttcccttcttgcgaaacatc
attgcccagtggcaacccagaaactgtgctcccatggctgactttttagacagctgggtc
catttgctgccagtctggattctggataatatactagatcagcttattttccccaaattg
caaaaagaggttgaaaactggaacccgctgacagacacagtcccgatccactcgtggatt
cacccttggctacctatgatgcagtcgcggctagagccactcttctcaccgattcggaat
aaactgtccaatgcccttcagaaatggcaccccagcgattcctctgccaaactgattctg
cagccctggaaggaggtgtttactccaggctcttgggaagccttcatggtgaagaacatt
gtgcccaagctaggcatgtgtctcagcgagtttgttattaatccacaccaacagcacatg
gaggtctttcactgggtcacggactgggaggggatggtcgctttgtccagcatcgtaggg
ctcctggagaaacatttcttccccaagtggttacaggtgttgtgttcctggctcagcaat
aaccccaattatgaagagatcacaaagtggtatctaggctggaagtctatgttctctgac
ttggtgttggctcaccctgccatcaaggacaaatttaatgaggctctagacatcatgaat
agagccgtttcctctagtgttggtgcttacatgcagccgggtgcccgtgagagcatcgct
taccttacacagacggagaaaaggaaggatttccagtatgaggctatgcaggagaggcgg
gatgcggagagcattgctcagaggggaataggggccgcagcagctgtgcccatgaacttc
aaggatctgatccagtccaaggcagaggagcacaacatcgtattcatgcctttaattggc
aagcggcacgagggaaaacaactgtacaacttcaaccgcatcgtcatctatatagacaga
ggtgttgtgtttgtacaaggagagaaaacgtgggtgcccacatccctgcagagccttatc
gacatggccaaatag
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