Xenopus laevis (African clawed frog): 447468
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Entry
447468 CDS
T01010
Symbol
nectin2.L, cd111, cd112, clped1, ed4, higr, hveb, hvec, nectin-1, nectin-2, ofc7, prr, prr1, prr2, pvrl1, pvrl2, pvrl2.L, pvrr, pvrr1, pvrr2, sk-12
Name
(RefSeq) nectin cell adhesion molecule 2 L homeolog precursor
KO
K06081
poliovirus receptor-related protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03266
Virion - Herpesvirus
xla04514
Cell adhesion molecules
xla04520
Adherens junction
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
447468 (nectin2.L)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
447468 (nectin2.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
447468 (nectin2.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
447468 (nectin2.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
447468 (nectin2.L)
04090 CD molecules [BR:
xla04090
]
447468 (nectin2.L)
Cell adhesion molecules [BR:
xla04515
]
Immunoglobulin superfamily
Nectin family
447468 (nectin2.L)
CD molecules [BR:
xla04090
]
Proteins
447468 (nectin2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
C2-set_2
Ig_2
ig
TM_ErbB1
C2-set_3
T4SS_pilin
Izumo-Ig
Ig_CD22
Ig_VEGFR-1-like_5th
Syndecan
DUF6558_C
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
447468
NCBI-ProteinID:
NP_001087644
Xenbase:
XB-GENE-947435
UniProt:
Q66J72
LinkDB
All DBs
Position
7L:114826968..114858438
Genome browser
AA seq
463 aa
AA seq
DB search
MHRLWSFLLVLCPVLQAQQITVNEKMTGTLGQQVTLPCTFTSSVDMQVTQIMWMKDSTNI
ATYSPQFGIHVQNKNDFNLTASPSSATLLIKLLRASDEGNYVCEVTTFPGGNRKGTTYLS
VKADPKNSAEAIPVVAGDIEVPVAKCASANGKPPSQITWRSTLPGNFDMTVNNNTDGTYT
VVSSFKLIPTWTADKQEVICVISYDSKETPIPVTLSVQYSPIVAIEGYDNNWYLKRTGAS
LTCNAHGNPQPTVYTWKTADGSPLPNSVKAKNNVLYVEEVDERVNTTIVCEVTNALGSRA
SQQEVLVRERALETQTNNAGAIAGGVIGGVLVVLLLAAVIFIVIRRGGVHKKERASYNPK
TRIFGSGKPSQEFTYQDDSEMGKPLKASGPLRDSGLSPSLAEEEEDESEERMKYDVLEDD
DEEEKFNEVGPMLQLRPHHDPYLDDDMESQTDGSIISRTAVYV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcctttggtcttttctcttggtgctgtgcccagttttgcaggcacaacagatt
actgtcaacgagaagatgactggtaccttgggccagcaagtcaccctgccctgcacattt
accagcagtgtcgacatgcaagtgactcagataatgtggatgaaggacagtaccaacatt
gctacctacagcccccagtttggcatacacgtgcagaacaagaatgatttcaatctgact
gccagcccgagcagcgccacgctcctcataaagctgctgcgggcttctgacgagggcaac
tatgtctgtgaggtcaccaccttccccggtggaaaccgcaagggcactacatatctcagc
gtgaaagctgatccaaaaaactcagctgaagctattcctgtagtggccggtgacatagag
gttccggtagcaaaatgtgcatcagccaatggcaagcctccttcccagatcacttggagg
tcgacactccctggcaatttcgacatgactgtaaataataacactgatggtacatatacg
gtggtgagcagcttcaagctcatcccaacctggactgctgacaagcaagaagtcatctgc
gtgatttcctacgactctaaagagacgccgatccccgtcaccctgtctgtgcaatacagc
ccgattgttgccattgaaggatacgataacaattggtacctgaaacggactggggcctct
cttacctgcaatgctcatggaaacccccagcctacagtatacacctggaaaacggctgat
ggctcgccgctgcctaactcggtgaaagccaaaaataatgtgctgtatgtggaggaagtg
gatgagcgagtaaatacaacaatagtttgcgaggtgaccaatgccctcgggagccgagca
tcccaacaggaggtgctagtgagagaacgtgcgctcgagacgcagacaaacaacgcagga
gccattgccgggggtgtcattgggggggtcctggttgtgctccttctggctgctgtcatc
ttcatcgtcatccggaggggaggggtgcacaagaaagaacgggcttcttacaaccccaaa
acccgaattttcggcagtgggaaaccctcccaggaatttacctaccaggatgactctgag
atgggaaaacctctgaaagcctctggtccattgagagacagtgggttgagcccctcgctg
gcagaagaagaggaggacgaatctgaagaaaggatgaagtacgatgttctggaggatgac
gatgaagaagagaaattcaacgaggtggggcccatgctgcaacttagacctcaccatgac
ccctacctggatgatgacatggagtctcagactgatggatcaatcatctccaggactgca
gtgtatgtgtaa
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