Xenopus laevis (African clawed frog): 447632
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Entry
447632 CDS
T01010
Symbol
nfkb1.L, ebp-1, kbf1, nf-kappa-b, nf-kappaB, nfkb-p105, nfkb-p50, nfkb1
Name
(RefSeq) nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 L homeolog
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04210
Apoptosis
xla04218
Cellular senescence
xla04620
Toll-like receptor signaling pathway
xla04621
NOD-like receptor signaling pathway
xla04622
RIG-I-like receptor signaling pathway
xla04623
Cytosolic DNA-sensing pathway
xla04625
C-type lectin receptor signaling pathway
xla04920
Adipocytokine signaling pathway
xla05132
Salmonella infection
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
447632 (nfkb1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
447632 (nfkb1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
447632 (nfkb1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Death
Motif
Other DBs
NCBI-GeneID:
447632
NCBI-ProteinID:
NP_001087808
Xenbase:
XB-GENE-985749
UniProt:
Q66IP9
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All DBs
Position
1L:complement(78110045..78174799)
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AA seq
959 aa
AA seq
DB search
MAQNMYDIDDAHLETFLRINPLFQEPMYMPSEPHLRNAEGPYIEITEQPKQRGFRFRYVC
EGPSHGGLPGASSEKNRKSYPQIKIHNYVGQVKVVVQLITNSKDIRLHAHSLVGKNCEDG
ICSLTVGPKDTIVGFPNLGILHVTKKKVIEILEARMTDAFKKGHNAALLVHPELNYTNSE
DRPLNEREKEIIRQAATQQSKDIDLSVVRLMFTAFLLDSEGRFTRSLEPVLSVPIFDSKA
PNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDENGGYWEGFGDFSPTD
VHRQFAIVFKTPKYKDVNITKAASVFVQLRRKSDYETSEPKPFLYYPEIKDKEEVQRKRQ
KLMPNFSDGYGGSGAGSGGGVGGGLYGGGGGAGGSAGGGYGFSSFSYNNYGGLNFHGGPM
NSGPCMKHESKSRCEEANQKHGETTNTQDASNEGSCLCIKTAQEKEERETAPAREEGEFC
KLHDCNFLSKAMQLAKRHAASLFDYAVTGDVRMLLIVQRHLASVQDENGDNILHLSIIHL
HSALVRIFLDITQGVVCDDIINVRNDLYQAPLHLAVITQQVDTVQDILEAGGDPLLLDRD
GNSVLHLACKEGDALTLSLLLKHKKTLEIINLPNNDGLNPIHVAVLANCMSCLRLLISAG
ADVNAQEQKSGKNALHLAVEQENISLAGCLLLEGDACVDSTTYDGNTPLHIAVGRSSTKL
TALLKAAGADSFIESFEPLYSFEDTQDEDDVDEGIVPGTKPLDIANCNEVLEILNGMPYR
SEVAPEDSLTQGDMKNLSKEVNQKLYNLLESQDLDKNWATLAQKLGLGMLNNAFRLSPLP
SKTLLDNFEVSGGTIRELLDALKRMHYTEAIEAIEQSQGILTLSGATTSSEAPIAAQRRD
SSMDDISYLKHQETESTCDSGVETSFQKLSISYSEFLKETEGICTELPQEPDCPLICSK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaacatgtatgatattgatgatgctcatttggaaacatttttacgtataaac
cctttatttcaagaacctatgtatatgccttctgagccacaccttcgaaatgctgaaggg
ccatacattgaaattacagaacaaccaaaacagagagggtttcggtttcgatatgtctgt
gaagggccatcacatggaggacttcctggggcttcaagtgaaaaaaacagaaagtcatac
ccacaaattaagattcataattatgttggtcaagttaaggttgtagtgcagctgataact
aacagcaaagacatccgactgcatgcccatagtctagttggtaaaaactgtgaagatggc
atctgttctctaactgtaggacctaaagatacaattgttgggtttcctaacctgggaata
cttcatgttacgaagaagaaagtgattgagattctagaggctcgcatgacagatgccttc
aaaaagggacacaatgctgcattattagtacacccagagctcaactataccaactctgaa
gataggccattaaatgagcgagaaaaagaaatcattagacaggccgcaacgcaacagtcc
aaggatatcgacctgagtgtggtgcgactcatgttcactgctttcctgctagatagcgaa
ggtcgatttactagatctcttgagcctgtattatcagttcccatctttgatagcaaagcc
cccaatgcatccaatcttaaaattgtgcgaatggacaggactgcaggctgtgtgacaggt
ggggaagaggtatatctcctgtgtgataaagtacaaaaagatgacattcaagtccgcttc
tatgaagaggatgaaaatggaggctactgggaaggatttggagacttctctcctactgat
gttcatagacagtttgccattgttttcaaaacgcccaagtacaaggatgtaaatattaca
aaggcagcgtctgtgtttgttcagcttcggaggaaatcagattatgaaactagtgaacct
aaaccatttctttactacccagaaataaaagacaaagaggaagtacaaaggaaacgccag
aagctcatgcctaatttttcagacggttatggtggaagtggtgcaggatctggtggaggt
gttggtggtggtttatatggaggaggaggaggagcaggaggctctgcaggtggtggctat
gggttttcttcattcagctataataattatggaggtttgaattttcatggaggccctatg
aattctggtccatgtatgaaacatgagtccaagtctcggtgtgaagaagccaaccaaaaa
catggtgagaccacgaatacccaagatgcatctaatgaagggtcatgtttgtgcatcaag
actgcacaagagaaggaagagagagagacagctccagcaagggaggaaggggagttctgc
aaactgcatgactgtaatttcctgagcaaggcaatgcagctagcaaagcgtcatgcagca
tccttgtttgactatgctgtaactggagatgtgaggatgttattaattgtgcagcgccac
ctagcttcagttcaagatgagaatggggacaacattctccacctgtctattatccacctc
cactctgcattagtaaggatcttcttggacataacacaaggggttgtgtgtgatgatata
atcaatgtgagaaatgacctttaccaggctccactgcatttggctgtgatcacccaacaa
gtcgacactgtgcaagatattctagaagctggaggtgacccattgctcttggaccgtgat
ggcaactcagtcctacatctggcttgtaaagaaggggatgccttgacattaagtttactg
cttaaacacaaaaagacgctggagatcatcaaccttccaaacaatgatggcttgaatcca
atccatgttgctgtacttgcaaattgcatgtcgtgcctccggctattgatatcagcagga
gcagatgtaaatgctcaggaacagaaatcaggaaaaaatgcgttgcatttggctgtagaa
caagaaaacatatctttagctggctgtcttcttctggagggagatgcatgtgttgatagt
accacatatgatggaaatacaccgcttcacatagcagttggaagaagctctacaaagctg
acagcacttctcaaagccgcaggtgccgattctttcattgaaagctttgaaccactctat
agctttgaagatacccaagatgaagatgatgtagatgaaggcattgtaccaggcacaaaa
cctctggacatagctaactgcaacgaggtacttgaaatactgaatggcatgccttacagg
tcagaagtagcccctgaagactccctgacacaaggtgacatgaaaaacctaagcaaagaa
gtaaatcagaagctgtacaacttgttagaaagccaggatttggacaagaactgggccacc
ttagcacagaagctgggtcttgggatgctgaacaatgctttcaggctaagtcccctccca
tctaaaacattactagacaactttgaggtttctggtggaaccataagagaactcctagat
gcattaaaacggatgcattacactgaagctattgaggccattgagcagtcacaaggtatc
cttacgttgtctggggctactacttcttcagaggcaccgattgctgcacagaggagagac
tcctccatggatgatatcagttaccttaagcatcaggagactgaaagtacatgtgacagt
ggtgtggagacatcctttcagaaactgagcatttcatattcagaatttctgaaggagaca
gagggaatttgcacagagcttccgcaggaaccagactgtcctctcatctgcagcaagtga
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