Xenopus laevis (African clawed frog): 447713
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Entry
447713 CDS
T01010
Symbol
ctdp1.S, ccfdn, ctdp1, fcp1
Name
(RefSeq) CTD phosphatase subunit 1 S homeolog
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
447713 (ctdp1.S)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
447713 (ctdp1.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
447713 (ctdp1.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
HAD phosphatases
Fcp/Scp phosphatases
447713 (ctdp1.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
447713 (ctdp1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
RTT107_BRCT_5
Biotin_lipoyl
LIG3_BRCT
BSH_CusB
Nairovirus_Gn
Motif
Other DBs
NCBI-GeneID:
447713
NCBI-ProteinID:
NP_001087852
Xenbase:
XB-GENE-865300
UniProt:
Q641F9
LinkDB
All DBs
Position
6S:complement(83730047..83781082)
Genome browser
AA seq
977 aa
AA seq
DB search
MQNRAQEEPSQSSQYCEVRLSGPRPLRLVEWKVYAGASVQIGSVLALAVPVLGAEVVRSH
EETGRPHRAPERKIKSDRAGVVQELCLKPGEVVPAGGVLVRLSSCNHPVVMKGLCAECGQ
DLTQLQSKNGKQQVPYSTATVSMVHSVPELMVSSEKAEQLGREDQLRLHRNKKVVLMVDL
DQTLIHTTEQHCQHMSRKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKLYELHVFTFGS
RLYAHTIAGFLDPEKKLFSHRILSRDECIDPYSKTGNLRNLFPCGDSMVCIIDDREDVWK
FAPNLITVKKYVYFQGTGDINAPPGSREAQMKSKVSCSKASEVTERSEASVQDSEHSKNI
LVEQHSNGHGKAMKELNGGCTANRELSKNNTECSDGLHEHDSSSSAPTDALNSNNGKPLA
DAPPSLEQDERTNVSISQPKTGAAKDLDFDLSSDSDSEGETRKISSPSSASGSENECKRS
WRKSNKKDEECIATQESCTDDDSKKAKPENHFERPVYESKNTLPVEEDEMEVQSAEQDSL
CDLGNGCTDKKEVETESQNSEQSGITVGESLDQSMEEEDEDSEDTDEDDHLIYLEEILVR
VHTDYYAKYDRYLKKEVDSVPDIRKIVPELKSKVLENVIISFSGLHPTNFPIERTREFYH
ARALGASIHKNLILKPDDPDRTTHLIAARAGTEKVRKAQNCKHLHVVNPEWLWSCLERWE
KVEEQLFPLKDDYMKSQRTISPTTFPDVHSAFQTPLFHPTPINPNTQPGPEVHLYDPVTG
KLIRKGSQASRESPYIQAPSPSVTLPVHGEHSSFRVVQLHQEQLFDDEELATANPDEEQS
GPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKKKTIKIKKSQNAA
QGNKLKNPEERNESSSSSERSLSGSRPRGHKRKLEEEEEEDAESEISKESSNEDEEGSSS
EADEMAAAIEAELNDFI
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcgagcgcaggaagagccttcccagtccagccagtactgcgaggtgcgcctc
tcgggcccccgacctttgcgtctggtagaatggaaggtgtacgcaggggcctcggtacag
atcggctcggtattggccctcgcggtgcccgtactgggggctgaagtggtccgcagtcat
gaggagacggggaggccgcacagagcgcctgagaggaaaatcaagtcggaccgcgcaggg
gtggtgcaggagctgtgcctaaagccgggagaagtcgtccctgccgggggtgttctggtg
aggttatccagctgtaaccatcctgttgtaatgaagggcctttgtgcagaatgtggccaa
gacttaacacagttacaaagtaaaaatggaaagcagcaggtgccttattcaacagccaca
gtttctatggttcatagtgtcccagaactcatggttagctcagagaaagcagagcaactg
ggacgtgaagaccaacttagattacatcgaaataaaaaagttgtccttatggttgattta
gatcagactttaatccacaccacagaacaacattgccaacatatgtctagaaaggggata
tttcacttccagctaggaaggggagaaccaatgctgcatactaggctacgtcctcactgc
aaagaattcttagagaagattgcaaagctgtatgaactgcatgtcttcacttttggtagc
aggctgtatgcccatactatagcaggttttttagatcctgaaaagaagcttttctctcac
agaatattgtctcgagatgaatgtattgatccttattccaaaacaggaaatcttaggaac
cttttcccttgtggggactcaatggtatgcattattgatgatcgagaagatgtttggaag
tttgcacctaatttgatcaccgttaaaaagtatgtgtactttcaaggcacaggtgatatt
aacgcacctcctggttcaagggaagcacagatgaagagcaaagtaagctgttcaaaagct
tcagaagtaacagagcggtctgaagcttctgtacaagattctgaacattcaaaaaacatt
cttgtggagcagcacagcaatggtcacggaaaagctatgaaggaactgaatggggggtgc
actgccaaccgtgagctttccaaaaacaatacagaatgcagtgatggactacatgaacat
gattcttctagtagtgctcctacagatgcattaaatagtaacaatggaaagccattggca
gatgcaccaccttctttagagcaagatgaaaggacaaatgtttccatttcccaaccaaaa
actggggcagcaaaagacttagattttgacttgtctagtgacagtgacagtgaaggagaa
actaggaaaatatcatccccatcttctgcttcaggtagtgaaaatgaatgtaaaagaagt
tggaggaaatcaaataaaaaggatgaggagtgtattgcaacacaagaatcgtgtacagat
gatgactccaagaaagcaaagccagagaatcactttgaaaggcctgtatatgagtcaaaa
aatacattgccagtagaagaagatgagatggaagtgcagtctgctgagcaggatagcctt
tgtgatttagggaacggctgtacagataaaaaggaggttgaaacagaatcccagaatagt
gagcaatctggtatcactgtaggagagtcacttgatcagagtatggaggaagaagatgag
gatagtgaagacacagatgaagacgaccacttaatataccttgaggaaatccttgtcaga
gttcatacagattactatgcaaagtatgatcggtacttgaaaaaagaggtggatagtgtt
ccagatattcgtaaaatagtgcctgagctgaagagtaaagtattggaaaatgtcataatt
tcattcagtggccttcacccaacaaatttccccatagagaggacacgagaattttatcat
gcaagagctttaggagcaagtatccataagaacctaattttaaaaccagatgatcctgat
aggacgactcacctcattgccgcaagggctggcacagaaaaggttcgaaaagctcagaac
tgtaaacacctacatgttgtaaatccagaatggctttggagctgtttggagcgatgggaa
aaagttgaagaacagctttttccattaaaggatgattacatgaagtctcaaagaacaata
agtcccacgacatttcctgatgttcatagtgcttttcagactccactttttcaccctact
cctatcaatccaaacacacaacctggtcctgaagtccatctgtacgatccagtaactgga
aaacttatccggaaagggtcgcaagcttccagggagtccccatatattcaagcacctagt
ccttctgtgacactacctgtccatggagagcattcatctttcagagttgttcagcttcat
caggagcaactgtttgatgatgaagaacttgctacagccaatccagatgaagagcaatcc
gggccttcgcgaagaaagcgtcagccaagcatgtctgagactatgcctttgtacacactt
tgtaaagaggatctggagagcatggacaaagaggttgatgacatattaggagaaggtagc
gatgacagtgacagtgaaaaaaagaagaccattaagataaagaaatcacagaatgcagca
caagggaacaaattaaaaaacccagaagaaaggaatgaatcctcttcttcaagtgaaaga
agtctgtccggtagcaggcctcgaggtcacaaaagaaagctggaagaagaggaggaggag
gatgctgaaagtgaaatcagtaaagagtccagcaatgaagatgaggagggaagcagctct
gaggctgacgagatggcagcagccattgaagcagaactgaatgatttcatatga
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integrated database retrieval system
