Xenopus laevis (African clawed frog): 447718
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Entry
447718 CDS
T01010
Symbol
nedd1.L, nedd1
Name
(RefSeq) NEDD1 gamma-tubulin ring complex targeting factor L homeolog
KO
K16547
protein NEDD1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
447718 (nedd1.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
447718 (nedd1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
447718 (nedd1.L)
Microtubules and associated factors
gamma-tubulin ring complex
447718 (nedd1.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
447718 (nedd1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WD40_like
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
eIF2A
NBCH_WD40
Beta-prop_Vps41
Beta-prop_LRRK2
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Frtz
WD_LRWD1
KNTC1_N
Beta-prop_SCAP
Beta-prop_SPT8
KAsynt_C_assoc
THOC7
Motif
Other DBs
NCBI-GeneID:
447718
NCBI-ProteinID:
NP_001087857
Xenbase:
XB-GENE-6253403
UniProt:
Q641F4
A0A8J0Q0Y8
LinkDB
All DBs
Position
3L:58048215..58082960
Genome browser
AA seq
671 aa
AA seq
DB search
MESRGGGGRVRLPGTTMQDNIRFVSAGDDVKIWDYSSMTTVEQFNPHSASHPVSSLCWSS
NNHFLVTASGSGDKIVVSSCKSKPVPLLELAEGKKQTCVNLNSSSQYVVSGGLDNTVNIW
DLKSKRLHRSLKDHKDEVTCVTFNANDCYVASGSMSGEIILHNVTTNLSSTPFGHGSSQP
IRHLKYSYVKKSLLGTVSDSGSVTLWDANSQNPYHVFESAHKAPASGICFSPVNDLLLVT
VGLDKRIICYDVSSKILLQTVVAESPLTAVDFMPDGATLAVGSSRGKIYLYDLRMLSSPV
KTVSAHKTSVQCIQFQHSNIYKSSKGPSSKSSILSTAVNKKPSTKTAAGGTQSANITKDL
PPSAISSLPQPVMPVDSKVLRVNDDKSGFPRSTSLDIIPSKETDFAKTSDYKSIDSFGRS
SLGDIFSPVRDDASHFRGAEDLSCKGNDLDYLPQFSTIPSSRRNPVGANTQGIHGSPLHL
IIESPIKEEDESQDSELKTRKPQLLKQDFRESSSKPASVDQNNLNNSPINSVTRTPEAIE
KTGHQILSQLKSDVPAHGTKIASPKVAATMSTQLASSLSEKIADTLASDRTGAPLTAIQI
NFIKNMIEETLDDFREACHRDIVNLQVEMIKQFHIQSSEIQMLLERYSLNESLVSEIEKL
REENKRLRANF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaggggaggagggggaagagttcgtttgccaggtaccaccatgcaggataac
atcagatttgtatcagctggagatgatgttaaaatatgggactactcatccatgactaca
gtggagcaattcaatccacacagtgcatcacacccagtatcgtccttgtgttggagcagt
aataatcattttctggtcactgcttctggcagtggtgataaaattgttgtttcaagctgt
aaatctaaacctgttccactgttagagcttgcagaagggaaaaagcagacctgcgttaat
ttaaattctagttcgcaatatgtagtcagcggaggtctggataatactgtgaacatctgg
gatttgaaatcaaaaagacttcatcgatccttaaaggatcacaaggatgaagttacgtgt
gttacatttaatgcgaatgactgctatgttgcctcaggctctatgagtggagaaatcata
ttgcataatgtaactactaatttatccagcacaccttttggtcatggaagcagccagcca
atacgacatttgaaatattcctatgttaagaagtcccttctgggcacagtgtctgacagt
ggcagtgtaaccctttgggatgccaatagccaaaatccatatcatgtgtttgaaagtgct
cacaaggccccagcctctggaatctgtttttctccagtgaatgacttgctgcttgtgact
gttggacttgataaaagaattatttgctacgatgtatccagcaagattctcttgcaaact
gtagtggcagaatctcccctaacagcagtagatttcatgccagatggtgcaacgttggca
gttggctcctctcgtggaaagatttacctttatgatttaagaatgttaagctcaccggtg
aaaacagtcagtgctcacaaaacatccgtccagtgtatacagtttcaacacagcaacatt
tacaagtcgagcaaaggtccctcaagtaaatcatccattctgtccactgcggttaacaag
aagccttcaacaaagacagctgctggaggaacgcaaagtgcaaacataaccaaagattta
ccaccatctgctatatcgtcattacctcaaccagtcatgcctgtagatagtaaagtactt
cgagtgaatgatgataaatcaggttttccaagaagcaccagtcttgatataatcccctca
aaagaaacagactttgccaaaacatctgattataaatctatagactcatttggaagaagt
agtttgggggatatattttctcctgtgagagatgatgcttcacatttcaggggagctgaa
gatttatcctgcaaaggaaatgatctggattacctgcctcaatttagtacaataccttct
tcaaggagaaatcctgtgggtgccaatacgcaaggaatacatggctctcccctacactta
attattgagagccctataaaggaagaagatgaatcacaagattccgaattaaaaacaagg
aaaccacaactcctgaaacaagattttagagaaagttcctcaaagccagcaagtgttgac
caaaataacctcaataattcacctattaattctgtgactcggacaccggaagcaattgaa
aaaacaggacaccaaattctctcccagttaaaatcagatgttcctgcacatggcacaaag
atagcaagtcccaaggtagctgcaactatgagtacacaacttgccagttctttgtctgaa
aagatcgcggatacccttgcaagtgacagaactggagcaccattaactgctatacagatt
aatttcatcaaaaatatgattgaggaaacactggacgacttcagagaagcatgtcataga
gatatagtgaatttgcaagtagagatgatcaaacagtttcacatacagtcgagtgaaata
cagatgttgttggaaagatactccttgaatgaaagcttagtttcagaaatagaaaagctg
cgggaagagaataaaagattgcgggccaatttttag
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