Xenopus laevis (African clawed frog): 450215
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Entry
450215 CDS
T01010
Symbol
nipbl.L, nipbl, nipbl-a, nipbl-b, nipbl.S, scc2, scc2-2, Scc2B
Name
(RefSeq) NIPBL, cohesin loading factor L homeolog
KO
K06672
cohesin loading factor subunit SCC2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
450215 (nipbl.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
450215 (nipbl.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
450215 (nipbl.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd3
Cnd1
Motif
Other DBs
NCBI-GeneID:
450215
NCBI-ProteinID:
NP_001087931
Xenbase:
XB-GENE-853277
UniProt:
Q1XG42
LinkDB
All DBs
Position
1L:complement(215252463..215346940)
Genome browser
AA seq
2949 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLTCRDEP
LVSQLIHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQATLARNPNVFREKSLQNRYGVQS
GLMMPQYKLPQNSMHGSPASSNYQQTTISHSPSSRFVPPQSSSTSRFIGQQNSPVPSPYA
PQSPAGYMPYSHPGSYQQQPQGSVSSPIVAGGLRNLHENKVQQSGSSTNHHADNSRHGTT
EDYLQMVQRLGGEDSDSSIRNAASFSLRSPQSVCSPAGSEGTPKGSRPLILQTQPPPYSS
PRDAPPDILLDSPDRKQRRPKKLKLSKDEKEQTEKSAMYDIISSPSKDSTKLTLRLTRVR
SSEMDQQGDMLSSMENSNISEGDSSFNVQFPGNASKTPVTPQDLSRPLNAAACFQEQTEF
LQVQQVPVLQPQTSAAAKPPQPLVAPSQPQQTGSITPYDEVELDALAEIERIERESAIER
ERFSKEVQDKDKPLKKRKQDSYPLEAGGATGGNRPASQETGSAGNGSRPALMVSIDLQQA
GRGDSQATVTQDSDFARKADDIKNCNDGYISGPQEDTVFKHNPENHPMPLRKTESDMECP
DKSVKSTTAKLSTESGLEESHKENKLCDIKSEPVECSEETKVSSDCSMETKSESCETDYD
DSMMEYKTSEGFNEGIKTEALLNETSNDVKLCDLQDESKENENQSKSSKVDNRLEMRQKL
STPKQKQSDGQPETPRQKFEGKSEALKQKVEVKSEAFKQKTEGKSDTIRQKSEGKPDTPK
QKTEGHPETPKQKNESKSETPKQKSESKPETPKQKNDGKPETPKQKSDRSETPKQKSESR
PDTPKQKNESRPDTPKQKIEGRQDTPRQKGEGRQEISRQKSEEHKSDGRPETPKHKHDMK
KDPNRLSTEKKPDLSKHKTDSKCDSPRVKPESRTDGAKQRVDGRPGHESSKRDGENPKQK
HDDKGESEKHKGEMSRLRRPESLRSFNKNDQETRPGSKPDTPKMDKAEKKHRHDSDDSRE
KHSSGEQKPRPGSPRIKQDGKSTPSKSDPSKSDPSKSKSDKPVLKSPASKDDKRIDVNKS
KVEGNKGHSDNKTGFPSYLLGGNQGTLKNFVIPKLKRDKDGNITQESKRSESKGEQKDKP
EKMGFVEDLNKGAKPVVVLQKLSLDEVQKLIKERDDKSKGSLKSNKNRPSKSSKGGIDQS
VLKELPPELVAEIESSMPLCERVKMNTRKRSTVKEKPKYTEISSGEDEESEETFEPSRKR
PKKGKSDADWQYDGDRERRSSGDHRRSGNDSRRGSRYRERSADDSEMEESPPPRLSEVAR
RLKKERQKKRKAYEPKLTPEELMDSSTFKRFSNAVENILENLEDMDFSAFGDDDEIPQEM
LLGKHQLSELGSESAKIKAMGITNKISSEKMVKLLGILEKNIQDGSKLSTMLNHNDTEDE
ERLWRDLIMERVTKSADACLTAINIMTSPSMPKAVYIEDVIEHVIQYTKFHLQNTLYPQY
DPVYRLDPHGGGLMSSKAKRAKCSTHKQRVIVMLYNKICDIVASLSELLEIQLLTDTTIL
QVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRN
FRLNSSDDDGEAMYIQMVTALVLQLIQCVVHLPSDKDHSEEESNKKIDQDVFITNSYETA
MRTAQNFLSIFLKKCGSKQAEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVH
QFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSINRILKQAPEGGDDIQQLQKA
LLDYLEENTETDPSLVFSRKFYIAQWFRDTTMETEKAMKSQKDDDSEGAHHAKEVESTGD
IMHRAEKRKKFLRIIIKTAPSQFSTLKSNSDTVDYDDACLIVRYLASMRPFAQSFDIYLT
QILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELL
GRFVLCRPQLAEQYYDMLVERILDTGISVRKRVIKILRDICLAQPTFPKITEMCVKMIRR
VNDEEGIKKLVNETFQKLWFTPAPQNDKEAMTRKIINITDVVAACKDTGYDWFEQLLQNL
LKSEEDASYKPVKKACTQLVDNLVEHILKYEESLADSDSKGVNSGRLVSCITTLFLFSKI
RPQLMVKHAMTMQPYLTTKCITQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMK
LIIKYGMTVVQHCVSCLGAVVNKATQNYKFVWACFNRYYGALLKLKSQHQEDPNSTVLTT
NKPALLRSLFTVGALCRHFDFDQEEFKGSSKVNTSVNIKDKVLELLLYFTKHSDEEVQTK
AIIGLGFSFIQHPVLMFEVEVKNLYNIILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQA
DRDWKKMSKQEDLKEMGDISSGMSSSIMQLYLKQVLESFFSTQSSVRHFALNVIALTLNQ
GLIHPVQCVPYLIAMGTDPEPSMRNKSDQQLIEIDKKYTGFIHMKAVAGIKMSYQVQQAI
NSNANQIVRGFRQDESNSALCSHLYSMIRSNRQHRRAFLISLLNLFDDAAKTEVNMLLYI
ADNLACFPYQSQEEPLFIMHHIDITLSVSGSNLLQSFKESMVMAKQKVKAPSSNEDSSSE
SDEVSRPKKTRRRGNSESDSDAEDDVEYVLRCLPSNASPLIEFANASQGILLLLMLKQHI
KNLCGFSDSKIQKYSPSESAKVYDKAINRKQSVHFHPKQTLEYLKRNMTCTKINDEVKRS
IAKQYLDFKMLMEHLDPDEEEEEGEVSASTDARNKAITNLLGGNSPKNNVAETEEEESDG
EEKAGGTSGLRKSKRLSDSSDVAVQMNETVDVQDVIAICSPKYKDRPQIAKVVQKTSHGL
SIRWMAGSYSGTWAEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKVAQTLRSL
YAAKDGTSS
NT seq
8850 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccataactactctagcaggaattgctagtctcaca
gacttattaaaccagctgcctcttccatctcccttacctgctacaactacaaagagcctc
ctgtttaatggacggatagcagaagaggttaactgcctcctgacttgcagagatgaacct
ctggtatcacaactaatccatagcctgaatcaggtgtcaacagaccacatagaactgaag
gataacttggggagtgatgatcctgaaggtgatataccagtcctgctgcaagccactctg
gctagaaatcccaatgtttttagggagaaaagtttgcagaacagatatggagttcaaagt
gggttaatgatgcctcagtataaacttccccagaattccatgcatggcagccctgcatct
tccaattatcaacaaaccactatctctcatagtccttccagtcgttttgtgccaccccaa
tccagttctacaagccggtttattggtcaacagaacagccctgtgcctagtccatatgct
ccccaaagtccagcgggatacatgccatattcccaccctggaagttaccaacaacaacca
caaggttctgtttcaagccctatagttgcaggggggcttaggaatctacatgaaaacaaa
gttcagcagtcgggcagctctacgaaccatcatgcagataattccaggcatggcactact
gaggactatctccagatggtgcaaaggctcggtggtgaggacagcgattcttcaataaga
aatgctgcttcgttttctctccgatcccctcagtctgtgtgctctcctgctggaagtgaa
gggacgccaaaaggatcaaggccattaatactacagacacagccgcccccttattcctcg
ccccgcgatgctcctcctgatattctcttggactccccagatcgaaagcagaggcgacca
aaaaagttaaagttaagcaaagatgagaaggaacagactgaaaagtcagcaatgtacgat
attattagttctccttctaaagactctaccaagctcactttaagactaacccgtgtgaga
tcttctgaaatggaccagcaaggagatatgctctccagtatggaaaacagtaacatttca
gagggagatagctcattcaatgtgcagtttccagggaatgcgtcaaaaactccagtcact
ccacaggacttaagtcgccctttgaatgctgctgcttgttttcaggagcaaactgaattc
ttacaggtgcagcaagtgcctgttttacaacctcaaacgtcagcagctgcaaaaccgcct
caacctcttgtggctccgtcacagccccaacaaacaggaagcataacgccatatgacgaa
gtggaactggacgctcttgccgaaattgagagaatagagcgtgaatctgctatcgagagg
gaacgcttttctaaagaagttcaggacaaagataagcccctgaagaaacggaagcaggat
tcttatccattagaagctggaggtgctactggaggaaacagaccagcttcccaggagact
ggttcagctggaaatgggtcacggccagcacttatggttagtatcgatcttcagcaggct
ggccgaggagactctcaggcaactgtaactcaggactcggactttgccagaaaggcagat
gacataaagaactgcaatgatggctatatttctgggcctcaggaggacactgttttcaag
cataatcctgagaaccatccaatgccattaagaaaaaccgagtcagacatggaatgtcct
gataagtctgtcaagagcacaactgctaagctgtcaactgaaagtggactagaagaatct
cacaaagaaaataaattgtgtgacatcaaatctgaacctgttgagtgcagtgaagaaaca
aaggtttctagtgactgttctatggaaactaagtctgaaagttgtgaaacagattatgat
gacagtatgatggagtacaaaaccagcgaaggtttcaatgaaggtataaagactgaggca
ctgttaaatgaaacgtcaaatgatgtaaagttgtgtgacctacaagatgaatctaaagaa
aatgaaaaccagagtaaatctagtaaagttgacaacagactggaaatgcgacagaaactt
agtactcccaagcaaaagcagagcgatggacagccagaaacacctagacaaaaatttgaa
gggaagagtgaggcactaaagcaaaaagtggaggtaaaatccgaagccttcaaacagaaa
acagagggaaaatcagatacaatcaggcaaaagagtgaggggaaaccagacacacctaag
caaaagacggaagggcaccctgaaacacctaagcaaaagaatgagagtaagtctgaaaca
cctaaacagaagagtgaaagtaagcctgaaacacctaagcaaaagaatgacggtaagcca
gaaacacctaagcaaaagagtgatagatcggaaacaccaaagcaaaaaagtgaaagcaga
ccagacactccaaagcaaaaaaatgaaagcaggccagacacccctaaacaaaagattgaa
gggcgtcaagatacacctaggcagaaaggtgaaggtcggcaagaaatcagccgacaaaaa
agcgaggagcacaaaagtgatgggcgtcctgaaaccccaaaacacaaacatgatatgaag
aaagatcccaacagactgtcaacagaaaagaagccagatttatccaaacataaaacagat
tcaaaatgcgactctcctagagttaagccggagagccgcacagatggagcaaaacagaga
gtagatgggagacctggtcatgaatcttcaaagcgggacggtgagaacccaaaacaaaaa
cacgatgacaaaggggaatctgagaaacacaaaggagaaatgtcaaggcttaggaggcca
gagtccttaaggtcctttaataagaatgaccaggaaacaagacctggaagtaaaccagat
acaccaaaaatggataaagcagagaagaagcatcggcatgattcggatgactctagagag
aagcattcttccggagagcaaaaaccaaggcctggtagtcccaggataaaacaggacggt
aaatcaacccctagtaaatcggatcctagtaaatcagatcctagtaaatcaaaatctgat
aaacctgtgttgaaatctcctgctagtaaagatgataaaaggattgatgttaacaaaagt
aaagtggaggggaacaaaggtcatagtgacaacaaaactgggttccctagttatttgttg
gggggaaatcagggtacactgaaaaactttgtcattccaaaactgaaacgggataaggat
ggcaatattacccaggagtctaagagatcagagtcaaaaggcgagcagaaggacaagcca
gaaaagatgggttttgtggaagatcttaataaaggagctaaacctgttgttgttcttcaa
aaactatctttggatgaggtacaaaaactaatcaaggagcgggatgacaaatccaaagga
tcattaaagtccaacaagaacagaccctctaaatccagcaaagggggaatcgatcagtct
gtgctgaaggaacttcctcctgaactggtggccgagattgaatcatccatgcctctctgc
gagcgtgtgaaaatgaacacaaggaaaagaagcacagtaaaagagaagccgaagtacacc
gagatcagctcgggagaggatgaagaaagtgaggaaacctttgaaccttcacgtaaaaga
cccaagaaaggcaaatcagatgcagactggcaatatgatggtgaccgcgagcgaagaagt
tctggtgaccatcgtcgcagtggaaatgactccaggagaggcagccgttacagggagcga
agtgcagatgattcagaaatggaagagtctccaccaccaaggctcagtgaagttgccaga
agactgaaaaaagagcgtcaaaagaaacggaaagcctatgagcctaaactaacacctgaa
gaattgatggattcctcgacatttaaaagattttctaatgctgtggaaaatattttagaa
aacttggaagacatggatttctctgcgtttggggatgatgatgagattcctcaggagatg
ctcctcggaaaacaccagctgagtgagttaggaagcgaatctgccaagattaaagctatg
ggaattacgaataagatctcatctgaaaaaatggtcaagttactaggcatattggagaaa
aatattcaagatgggtcaaagctgtcaactatgctgaaccataatgacacagaagatgaa
gaaaggctgtggagggatctgattatggagagagtcactaagtctgctgatgcctgcttg
acggccatcaacatcatgacatcaccaagcatgcctaaagcagtctatatcgaggatgtg
attgagcacgttatacagtacactaaattccatttgcaaaatacactttatccacagtat
gaccctgtttataggttggatcctcatggggggggattaatgagttctaaagcaaaaaga
gccaaatgttcaacccacaagcagagagtcatcgtgatgctgtacaacaaaatctgtgac
attgttgctagcttatctgaattgttagaaatccagctccttaccgatacaaccatcctt
caggtgtcttctatgggaattacaccattttttgtagaaaatgtcagtgagttgcaacta
tgtgctatcaagctggtcactgcggttttttcaaggtacgaaaaacataggcagctcatt
ttggaagagctctttacctctcttgcaaggcttccaacaagtaaaagaagcctgaggaat
ttcaggttaaacagcagcgatgatgatggagaagcaatgtacattcagatggtgacagcg
ttggtgttacagttgatacagtgcgttgtgcatttaccctcagacaaagatcattcagaa
gaggagtccaacaaaaaaattgatcaggatgttttcattaccaactcttatgaaacagca
atgagaacggcacagaacttcctctccattttccttaaaaagtgtggaagtaaacaggcg
gaagaggattacaggccattgtttgagaactttgtccaggatcttctatctactgttaac
aagccagagtggcctgctgctgagctgctgttgagtttattgggaagactactggttcac
cagtttagcaacaaatcaacagagatggctctgagagtggcatctttggattatctgggg
actgttgctgcacggctcaggaaggatgcagtcaccagcaagatggatcaaggatctata
aaccggattctgaagcaggctccagaaggtggtgatgatattcagcagctacaaaaggca
ctgctagattatctggaggaaaatacggagactgatccatcattagtgttttctcggaag
ttttatatagcccagtggtttcgtgacactacgatggagacagagaaagctatgaaatcc
caaaaggatgatgactctgagggagcacaccatgcaaaggaagtggagtctacaggagac
attatgcatcgagcagagaagcggaaaaagtttcttcgaatcatcattaaaactgcccca
tctcaatttagcactttgaagtcgaattcagacacagtggattacgatgatgcgtgtttg
attgtacgatacttggcctctatgaggccgtttgcgcagagctttgatatttatttgact
cagattttgcgggtacttggggagaatgctattgctgtcagaacaaaagctatgaaatgt
ttgtctgaagttgttgctgtagatcccagcattcttgcaaggctggatatgcaaaggggt
gttcatgggagactaatggataactccaccagtgtccgagaggcagctgtggaattgctt
ggacgctttgtgctctgcaggccgcagcttgcggagcagtattatgatatgctcgtagag
agaattctggacactggtatcagtgtaaggaaaagagtcataaagatcttgagagacatc
tgtttggcgcaaccgacctttcctaaaatcactgaaatgtgtgtaaaaatgatcaggaga
gtaaatgatgaagaaggcattaagaaattagtcaatgaaacattccagaagctctggttt
acgccggcgcctcagaatgataaagaagcaatgacaaggaaaataataaacatcacagat
gtggttgcagcttgtaaagatactggctatgactggttcgaacaactgcttcaaaatttg
ctaaagtcagaggaggatgcttcctataaacctgtgaagaaggcctgtactcagcttgtt
gataatcttgtagagcacatactgaaatatgaggagtctctagctgattctgacagcaaa
ggtgtaaattctggccggttggtgtcttgtataaccaccttatttctgttcagcaaaatc
aggcctcagcttatggtcaagcatgcaatgaccatgcagccgtacctaaccactaaatgt
atcacacaaaatgatttcatggtgatctgcaatgttgcaaaaattctagagctggtcgtt
ccgctgatggagcatcctagtgagaccttcttagcgacaatcgaggaagatcttatgaag
ctcatcattaaatacgggatgacggtggtacaacattgtgtcagttgtctcggtgcagtt
gtaaataaagcaacacagaactacaagtttgtttgggcctgttttaataggtattatggt
gctcttttaaagttaaaaagtcagcatcaagaagatccaaacagtacagtcctgaccaca
aacaaaccagcacttctgcgctcactgtttaccgtcggagcactgtgtcgccattttgat
ttcgatcaggaagagttcaaaggcagcagcaaagtaaatacttcggttaacatcaaagat
aaagttttggagctcttactgtattttacgaaacattcagatgaagaggtgcagacaaaa
gccattattgggcttggtttttcatttattcagcatccagttctgatgtttgaagtggaa
gtgaaaaatttgtacaacatcatactctctgataagaactgttctgtaaatttaaaaatc
caagttctcaaaaacctccaaacctacttacaagaagaagatacccgtatgcaacaggcc
gatagggactggaaaaagatgtcaaagcaggaagatttaaaagaaatgggcgatatttcc
tcagggatgagcagctcaattatgcagctttacctcaaacaggtcttggagtccttcttt
agcactcagtccagtgtacgccactttgccctaaatgtcatcgcactgactttgaaccaa
gggctcatccatcctgttcagtgtgtgccatatctgattgcaatgggaacagacccagag
ccgtccatgcggaacaaatcagatcagcagctgatagaaatagacaagaaatacactgga
ttcattcatatgaaagctgtggcaggtataaagatgtcataccaggtgcagcaagcaatc
aattcgaatgcaaatcagattgtgcgaggattccgtcaggatgaatctaatagtgcttta
tgctcccacctgtactccatgatccgaagcaaccgccagcacagacgagcctttctcatc
tcgctgctcaatctctttgatgatgctgcgaaaacagaagtgaatatgctcttgtatata
gcagacaatctcgcatgttttccatatcaaagccaggaagagcctctcttcatcatgcat
cacatagacattacattgtctgtgtctggcagcaacctgctgcagtccttcaaagagtca
atggtgatggccaaacaaaaagtgaaggcaccatcatctaatgaagacagcagcagcgaa
agtgacgaagtcagtcgcccaaagaaaacaaggcggcgaggaaactcggaatctgactcc
gatgcagaagatgatgtggaatatgtgctgagatgcctcccaagtaatgcttctcccctc
attgagtttgcaaatgcctcccaaggaatcctattgctactgatgctgaagcagcatata
aagaacctttgtggattctcggacagtaaaattcagaagtattccccctctgaatctgct
aaagtgtatgacaaggcgataaacagaaaacaaagcgtccatttccaccctaagcagacc
cttgagtacctaaagaggaatatgacttgtacgaagattaacgatgaagtcaagaggtca
attgcaaaacaatatttggatttcaaaatgctgatggagcacttggatcccgatgaggag
gaggaggaaggagaagtatccgctagcacggatgccagaaataaagccattaccaattta
ctgggaggtaacagtcctaaaaacaatgtggctgagacagaggaggaagaaagtgatggg
gaggagaaagcagggggcacatcagggctaagaaaatcaaaaagattatcggattcttcg
gatgtggcagtgcagatgaacgaaactgtagatgtccaagacgttattgcaatttgtagt
ccaaagtacaaggatcggccgcagattgcaaaagtagtgcagaaaaccagccacggcttg
agcattcgatggatggccggctcctacagtggcacctgggccgaagccaaacgccgggac
ggcagaaaactggtgccttgggtagacactatcaaagagtcagacattatttacaaaaaa
atagctctgacgagcgctaataagctgactaataaagttgctcagactttacgatcgctg
tatgcggccaaggacgggacttccagctaa
DBGET
integrated database retrieval system
