Xenopus laevis (African clawed frog): 494585
Help
Entry
494585 CDS
T01010
Symbol
sox9.L, cmd1, cmpd1, sox-9, sox9, sox9-a, sox9-b, sox9b, sra1
Name
(RefSeq) transcription factor Sox-9-B
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
494585 (sox9.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
494585 (sox9.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
494585
NCBI-ProteinID:
NP_001087942
Xenbase:
XB-GENE-1034775
UniProt:
Q6DFF5
I3QHH5
LinkDB
All DBs
Position
9_10L:21853266..21875574
Genome browser
AA seq
476 aa
AA seq
DB search
MNLLDPFMKMSEEQDKCLSGAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGDQEM
KKETEDEKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQSEQDDSAEQTHISPNAIFKALQADSPHSTSSMSEVHSPGEHSGQSQGPPTPPTT
PKTDVQPGKPDLKREGRPLQESGRQPPHIDFRDVDIGELSSEVISTIETFDVNEFDQYLP
PNGHPGVGSAQAPYTGSYGISSTPSATTGAGSAWMSKQQQQPQQHSLSTINSEQSQSQQR
THIKTEQLSPSHYSDQQQQHSPQQLNYSSFNLQHYSSSYPTITRAQYDYTEHQGSNSYYT
HASGQNSGLYSNFTYMNPSQRPMYTPIADTTGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttggatcccttcatgaagatgtcagaagagcaagataagtgcctgtccggg
gctcccagcccaacaatgtccgaggactcagcagggtccccgtgcccatccggctctggc
tccgacacggagaacaccagaccccaagaaaacactttccccaaaggggaccaggagatg
aagaaggagacagaggacgagaagttccccgtgtgcatcagagaagcggtcagccaggtg
ctgaagggatatgactggaccctggtaccgatgccagtcagagttaatggatccagcaag
aacaagccccatgtcaagagacccatgaatgccttcatggtctgggcacaggctgcaagg
aggaagctggcagaccaatatccccatctgcacaatgcagaactcagcaagacgctgggg
aagttatggaggcttttgaatgaaggtgagaaacgccctttcgtggaggaagcagagagg
ctgagggtccaacacaagaaggatcatcccgactacaagtatcagccacggcgcagaaag
tctgttaagaacgggcagtcagaacaagatgatagtgctgagcagacccacatctcccct
aatgcaattttcaaggccctacaggctgactccccacattctacttccagcatgagtgaa
gtccactctcctggagaacattcaggtcaatcccaaggcccaccgactcctccaaccacc
cccaagacagatgtccagcctggaaagccagacttgaagagggagggcaggccactgcag
gagagcggtaggcaaccgcctcacattgatttccgtgatgtggacattggtgagctgagc
agtgaggtcatctccaccatcgaaacctttgacgtcaatgaatttgaccagtacctgcca
cccaatggccacccaggggtcggctccgctcaggccccgtacacaggcagttatggcatc
agcagcacccctagtgccactacaggtgctggttctgcctggatgtctaaacagcaacag
cagcctcagcaacactcactgtcaaccataaacagcgagcaaagccagtcccagcaaagg
acacacatcaagactgagcaactgagcccaagtcattacagtgaccagcagcaacagcac
tccccccagcaactgaactacagctccttcaacctacagcattacagctcttcctaccca
accatcacccgggcacagtatgactacacagagcaccagggctccaactcctattacact
cacgcaagtggtcaaaattctggtctctactccaactttacctacatgaatccaagccaa
cgccccatgtacacccctattgcagacacaacgggagttccatcaatcccccagacacac
agcccacagcactgggagcagcctgtctatacacaactcacaagaccctag
DBGET
integrated database retrieval system
