KEGG   Xenopus laevis (African clawed frog): 494642
Entry
494642            CDS       T01010                                 
Symbol
rab11b.1.L
Name
(RefSeq) uncharacterized protein LOC494642
  KO
K07905  Ras-related protein Rab-11B
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    494642 (rab11b.1.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    494642 (rab11b.1.L)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    494642 (rab11b.1.L)
   04031 GTP-binding proteins [BR:xla04031]
    494642 (rab11b.1.L)
Membrane trafficking [BR:xla04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    494642 (rab11b.1.L)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   494642 (rab11b.1.L)
  Exosomal proteins of other body fluids (saliva and urine)
   494642 (rab11b.1.L)
  Exosomal proteins of colorectal cancer cells
   494642 (rab11b.1.L)
GTP-binding proteins [BR:xla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    494642 (rab11b.1.L)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 PduV-EutP ABC_tran AAA_16 Gtr1_RagA TniB AAA_14 FeoB_N NTPase_1 DUF3289 AAA_21 Csa3_N FAD-SLDH AAA_24 YtzH
Other DBs
NCBI-GeneID: 494642
NCBI-ProteinID: NP_001087959
Xenbase: XB-GENE-17332887
UniProt: A0A974I0Y5 Q641B7
LinkDB
Position
1L:110543937..110555868
AA seq 218 aa
MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
IADRSAHDESPGNNVVDISVPPTTDGQKSSKLQCCQNL
NT seq 657 nt   +upstreamnt  +downstreamnt
atgggagccagagatgacgaatacgattatttatttaaagttgttttgattggagactct
ggagtaggcaaaagtaacctgctgtctcgttttacccgtaatgaatttaacttggagagt
aaaagtaccattggagttgaatttgccaccaggagtatccaggttgatggaaagactata
aaggctcagatctgggacacagctggacaggagagatacagagccatcacatctgcttat
tatcggggtgctgtgggtgctcttctagtttatgacattgctaaacatctgacctacgag
aatgtagagcgttggctgaaggaattaagagaccatgcagacaacaacattgtaataatg
ctggttgggaacaagagtgatttgcgtcatctccgtgcagtccccacagatgaggcaagg
gcgtttgcagaaaagaacaatctgtcattcattgaaacttctgcacttgattcaacaaat
gtggaggaagccttcaagaacatcttgacagaaatctaccgcatagtgtcacagaaacag
attgcagataggtcagctcatgatgagtctcctggtaacaatgtggtggatatcagtgtc
cctccaaccacggatggacagaaatccagcaaattgcagtgctgtcagaacctgtga

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