Xenopus laevis (African clawed frog): 494709
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Entry
494709 CDS
T01010
Symbol
prdm2.S, prdm2
Name
(RefSeq) PR domain containing 2, with ZNF domain S homeolog
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
494709 (prdm2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
494709 (prdm2.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
494709 (prdm2.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
494709 (prdm2.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
494709 (prdm2.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
494709 (prdm2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_11
zf-C2HC_2
zf-CHCC
zf-C2HE
PyrI_C
Motif
Other DBs
NCBI-GeneID:
494709
NCBI-ProteinID:
NP_001088018
Xenbase:
XB-GENE-5957570
UniProt:
Q498K4
LinkDB
All DBs
Position
7S:complement(83365472..83430473)
Genome browser
AA seq
1610 aa
AA seq
DB search
MNEDLIRSSEALETLTEVPEHVLRGLPEELRLAPSAVDNRRLGVWARKQVQRGKKFGPFV
GEKKKRSQVKNNVFMWEVYYPNLGWMCVDATDPQKGNWLRYVNWARSAKEQNLCSLEINR
AIYYKTLKPIEPGEELLVWYNGEDNPDIAAAIEEERAASHRSKRSSPKSRRGRKRTFNVK
KKINLENQGEKSADDLISAKMKDSPDIPSQEDIKPLGSPILSLEQTAVIQEMVNQNVLPE
HVSVSTQEVNITEEESAVTEQTDIDDLHKDSSESVTQEEESGDMLEEIRSTSDETPEGSP
KKKLTAKISKPKVDINGELTESFLYPCQHCERKFTTKQGLERHMHIHVSYVNHAFKCRYC
GKAFGTQINRRRHERRHEAGLKRKTLIVSASSEFGQSQKHIIDSLKTEVNNSTRIYCKTN
ESERDMSQSFLSDENCESREMHPCKYCKKIFGTHTNMRRHQRRVHERHLIPKGVRRKGSL
LEDPQLESEQMPPAENIYVANTEIEEDGEADDVYIMDISNNISENLTYYIDGRIQSNSTS
SSCDVIEVETNTTDVLGLNCLITPIKVEVSQNIKQLQSVSVPDNPLNDSTCCGNNEPKKR
RTISPPLLTKIKTEVELEPITPTCSISIPLSVSVSDNLSFPKEKHVYLSSKLKQLLQMQD
SNTSQVSPSLLSEVSKSGAALSTVSNRFKRRTTSPPSSPQHSPGSKEFVKQIDGKTTWTE
VLGPKVPKCESLDSSPAWSLSGKEERDNTSPSCSEEFKLSKDWLSNSPFGNSSFQQPLDL
SSGVKQKSENCSQSQVPWESVLDLSLNRKADSDSDSKELKGINLCIGIKKKKPTACMLKK
VLLNEYDGIEITGEYIQQSENILHHCKSEDQRLVLDFGTGSNEEISLPPDNSVPPPVENT
HVAVSQSPPILTSSEVHLLNPNPPASLTEVRSPPSLLTTTLPSLPDSLCSVPATPSCPSS
ISASTQSPLPVLSPTASPSPPPSPADDPSVSASPGPPTLSSSSPTSSSSSSSSSCSSPPP
LSVVSYVVSPSVNSETSAVTFIKQEKTEEDVIEGNENEKDPLSESFNKSFICNVCESPFV
SIKDLARHIFVHAEDWPFKCEFCVQLFKDVPNLSEHRLLLHGVGKIFVCSLCKKEFAFLC
NLQQHQQDLHADKEYSHQELESGTLRPQNYTDPSKMNAVHERMHSDPMTPNPDDDRDLND
SSEELYTTIKIMASGEKTKDRDIRMGLNQHYPSFKPPPFQYHNKNPMGIGATATNFTTHN
IPQTFTTAIRCTKCGKGVDNMPELHKHILVCASASDKKRYTPKKNPIPLRQTGQSKNGVV
ILETSDKTAFCNMGQPKKLNFTIEIGKLSSNKLRQSAFKKKNQLVHKAILQKNKTAKQKT
GVKANMATDPESHVCPYCNRKFTYIRSLNKHASFSCPKKPASPPSKKHVSKSSKKARSTF
SSSTKKHKVSSIRRTADAEIKMQSTETNLGKTRARSLGPTPVQLPSMPNKPKQSLKYAPQ
VNSKKQNVIRNSSPMRTAKHLAPYEGKKAKKPVLNNFTSSFGTAPKKLHVRVQKSKLQNK
SMAKKKKTDKFYVKSRKRISGPITRSSQLTADPVNKRDDVLGKPDSRSFP
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggatttaataagatcttcagaagcacttgagacattgactgaagtgcctgag
cacgtacttaggggccttccagaagaactgaggcttgcgccttctgctgtggataacagg
agacttggtgtctgggccagaaagcaagttcaaaggggaaagaaatttggaccatttgtt
ggtgaaaaaaagaagcgttctcaagtaaagaacaatgtgtttatgtgggaggtatactac
ccaaaccttggatggatgtgtgtcgatgctactgatcctcagaagggcaactggttgcga
tatgtgaactgggctcgctctgcaaaggagcagaatttgtgctctctagaaatcaataga
gctatatactacaagactctaaagccaattgagccaggggaagagctcttagtgtggtac
aatggggaagacaacccagatatagcagctgctattgaggaagagagagctgccagccac
cgaagcaagaggagctcgccgaaatccaggaggggtagaaagagaacattcaatgttaaa
aagaagattaacttagaaaatcaaggagagaagagtgctgatgatctcatttctgccaaa
atgaaggattctccagacattcccagtcaagaagatataaagcctcttggttcccccatt
ctttctcttgagcagactgctgtgatccaagaaatggtaaaccagaacgtccttccagag
cacgtctccgtttctactcaggaggttaatattacagaggaagaaagtgctgtaactgaa
cagacagatattgatgacttgcacaaagacagttctgagtcagtgactcaagaggaagaa
agtggtgatatgttagaagaaattagaagtacatctgatgaaaccccagagggctcccct
aaaaagaagctaactgctaaaatctcaaaacctaaagttgatatcaatggggaattaaca
gaatcatttctgtatccttgccaacattgtgagagaaaattcacaactaagcaaggtctt
gaacgtcatatgcatatacacgtttcatatgttaatcatgcatttaaatgcagatactgt
gggaaagcatttggtactcagattaatcgtagaagacatgagcggcgccatgaagctgga
ctaaaaagaaaaactttgattgtatcagcatcaagtgaatttggtcaaagtcaaaagcac
ataattgattcccttaaaactgaagtaaataacagtactagaatttattgtaaaacaaat
gaatccgaaagggatatgtcacagtcttttctttcagacgaaaactgtgaatcaagagag
atgcatccctgtaaatactgtaagaaaatatttggaacacatacaaacatgcgtcggcat
cagcgcagggttcatgagcgtcatcttattcctaagggtgtaaggcggaaaggaagtctg
ctggaagacccacagttagaatctgagcagatgccaccggctgagaatatatatgttgca
aatacagaaattgaggaggatggagaagctgatgatgtgtacattatggatatctcaaac
aatatatcagaaaaccttacttactatattgatggcagaatacagtcaaacagcactagt
agcagttgtgatgtgatagaagttgagactaacacaacagatgttctgggacttaattgt
ttaattacacctattaaggtcgaagtgtcccaaaatattaagcagttgcagtcagtcagt
gtgccagataatccacttaatgactctacttgctgtggaaataacgaaccaaaaaagaga
agaactataagccctcctctgctaacaaaaataaagactgaagttgaacttgaaccaata
acacctacttgttctattagtatcccactaagtgtatctgtgagtgataacctatcattt
ccaaaagaaaaacatgtctacctgtcttcaaagctgaaacagcttcttcaaatgcaagat
agcaatacgtctcaggttagtccctcattgttgtctgaggtttcaaaatcaggggcagcc
ttgtcaacagtgtccaacaggtttaaaaggcgtacaacttctcctcccagttctccacaa
catagtccaggctctaaagaatttgtaaaacaaatagatgggaaaacaacatggactgaa
gtactaggcccaaaagtgccaaaatgtgaaagccttgacagctctcctgcctggagttta
tctggcaaagaggagagagataatactagtccatcatgttctgaagaatttaaattgtct
aaagactggctgtcaaattcaccatttggtaattctagcttccagcaaccattggattta
tcaagtggagtaaagcaaaaatcagaaaactgcagccaatcacaagttccttgggaatct
gtacttgatcttagtttaaatagaaaggcagatagtgattctgattcaaaggaattaaaa
gggattaacttgtgtattggtattaaaaagaaaaaacccactgcatgcatgctgaaaaag
gtcctgttaaatgaatatgatgggatagaaattacaggcgagtatattcagcaatctgaa
aacattctgcatcactgtaaatctgaagatcagagactggtgttggattttggtactggt
tcaaatgaagaaatatctcttccccctgataattctgtacctcctccagttgaaaataca
catgttgctgttagtcagtcaccacctattctaacttcatcagaggtgcacctcctaaat
cctaatcctcctgcatctttgacagaagtaaggtcaccaccatcacttttaactaccact
cttccttcactcccagattctttatgcagtgtccctgcaacaccatcttgcccatcatcc
atatcagctagtacacagtcaccactgcctgttctttcacctactgcatcaccttcccca
cccccttctcctgctgatgatccctcagtctctgcatcacctggtcctccaaccctctca
tcttcatctcccacttcatcgtcttcatcctcctcctcctcctgttcatctcctccccct
ttatctgtagtttcatatgttgtgtctccttctgtaaattcagaaacttctgcagttaca
tttattaaacaagagaagactgaggaagatgtgatagagggtaatgaaaatgaaaaagac
ccattgagtgaaagttttaataaaagtttcatctgtaatgtatgtgaatcaccgtttgtc
tctattaaagaccttgcaaggcatatttttgttcatgctgaagactggcccttcaaatgt
gaattttgtgtacagctttttaaagatgtgcccaatctatctgaacaccgtcttttgcta
catggagttggaaagatttttgtgtgttctttatgcaaaaaggaatttgccttcctttgt
aacctgcagcagcatcagcaagatttgcatgcagataaagaatacagccatcaagaattg
gaaagtggaactctaagaccacaaaactatacagatcccagtaagatgaatgcagttcac
gagaggatgcacagtgatcccatgactccaaatccagacgatgatcgggatttaaatgat
tcatctgaagaactttatacaaccataaaaattatggcgtcaggtgaaaaaacaaaagat
cgtgatattcgaatgggtcttaaccagcactaccctagctttaagccaccaccttttcaa
taccacaataaaaatccaatgggtattggagcaactgcaactaatttcactactcacaat
attccacaaacatttactactgctatccgttgcactaaatgtggaaagggtgttgacaac
atgcctgaattgcacaaacatatattagtatgtgcttctgcaagtgacaaaaagagatac
acccctaaaaagaatccaattcctttgaggcagactgggcaatctaaaaatggggttgtc
attctagagacctctgataaaactgcattttgcaatatgggacaacctaaaaagcttaac
tttaccattgagattggtaaattatcttcaaacaagcttagacaaagtgcttttaaaaag
aagaatcagcttgttcataaggcaatattgcagaagaataagactgctaaacaaaagaca
ggtgttaaagcaaatatggctacagatcctgaatctcacgtttgcccatattgtaacaga
aagtttacatatatcagaagtttaaataagcatgcatcatttagctgtccaaagaagcca
gcctcacctccttcaaaaaagcatgtttctaagtcatcaaaaaaagcacgttccactttt
tcatcttctaccaagaaacacaaagtaagcagcattcgtagaacggcagatgcagagatc
aaaatgcaaagcacagagacaaatttaggaaaaactcgagcaaggagcttaggacctaca
ccagttcaattaccttctatgcctaacaagcccaagcaaagtctgaaatatgcacctcag
gttaattccaaaaaacagaatgtgataagaaactctagtcccatgagaactgcaaaacat
cttgctccttatgagggaaagaaagcaaaaaaacctgtgctgaataatttcacatcatca
tttggcacagcaccaaaaaaactgcatgtccgagtccagaaaagtaaactgcaaaataaa
tccatggcaaaaaagaaaaaaactgacaagttttatgttaaatcaaggaaaagaattagt
ggacctatcacgcgaagctctcaattgactgcagacccagtgaataagagagatgacgtg
ctgggaaagccagattccaggagctttccttaa
DBGET
integrated database retrieval system
