Xenopus laevis (African clawed frog): 494717
Help
Entry
494717 CDS
T01010
Symbol
atg4b.L, apg4b, atg4b
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
494717 (atg4b.L)
04136 Autophagy - other
494717 (atg4b.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
494717 (atg4b.L)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
494717 (atg4b.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
494717 (atg4b.L)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
494717 (atg4b.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
494717 (atg4b.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
494717 (atg4b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
PH
Motif
Other DBs
NCBI-GeneID:
494717
NCBI-ProteinID:
NP_001088025
Xenbase:
XB-GENE-967116
UniProt:
Q640G7
LinkDB
All DBs
Position
5L:complement(134964975..134987326)
Genome browser
AA seq
384 aa
AA seq
DB search
MDAATLTYDTLRFADTPDFPETAEPVWVLGRKYSALTEKEQLLNDITSRLWFTYRRNFQA
IGGTGPTSDTGWGCMLRCGQMIFAQALICRHVGRDWRWDKQKPKGEYLNILTAFLDKKDS
YYSIHQIAQMGVGEGKYIGQWYGPNTVAQVLRKLAVFDQWSSIAVHIAMDNTVVVDEIRR
LCRAGSGESSDAGALSNGYTGDSDPSCAQWKPLVLLIPLRLGLSEINEAYIETLKHCFMV
PQSLGVIGGRPNSAHYFIGYVGDELIYLDPHTTQLSVEPSDCSFIEDESFHCQHPPCRMH
VSEIDPSIAVGFFCSSQEDFEDWCQHIKKLSLSGGALPMFEVVDQLPLHLSNPDVLNLTP
DSSDADRLDRFFDSEDEEFEILSL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctacgctcacatacgatactctgcgctttgccgatactccagactttcct
gaaacagcggagccagtttgggtgctggggaggaagtacagtgcattgacagagaaagag
cagctcctgaatgacatcacatccaggctctggttcacctacagaagaaactttcaagca
atagggggcacagggccaacgtctgacacgggctggggctgtatgctgcgctgtggccag
atgatctttgctcaagctttgatctgcagacatgtaggaagagactggagatgggacaaa
cagaaacctaaaggagaatatctaaacatcctcacagcttttctggacaaaaaagatagt
tattattccatccaccaaattgcacaaatgggagttggagaaggcaaatacattggccag
tggtatggtccaaacacagtggcacaagtcctgaggaaacttgcggtctttgaccagtgg
agctctattgctgttcatatagctatggataacacagttgtggtggatgagatacgtaga
ttatgcagggcgggaagtggtgagagctctgatgctggggcccttagtaatggctataca
ggggactctgaccccagctgtgcccagtggaagcctcttgtgctgctcatacctcttcgg
ctgggactaagtgagatcaatgaagcctacattgaaacactaaagcactgctttatggta
cctcaatccctgggggttattggtggccgacccaacagtgctcattacttcataggatat
gtaggggatgagctgatctacctggaccctcacactacacagctgtcagtagaacccagt
gactgcagttttatagaagatgagagtttccactgtcagcaccctccatgtcgaatgcat
gtgtcagagattgacccttctattgctgtgggctttttctgtagctctcaagaagacttt
gaggattggtgccaacacatcaaaaagctgtctctttctggaggagccttgcccatgttt
gaagtggtagatcagttacctttacatttatccaatccagatgtcctgaacctcacacca
gattcatcagatgcagatagacttgacaggttctttgattctgaagatgaagaatttgaa
attctatcactatga
DBGET
integrated database retrieval system
