Xenopus laevis (African clawed frog): 494817
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Entry
494817 CDS
T01010
Symbol
clasp1.L, clasp1, clasp1-a, clasp1-b, clasp1a, mast1, XCLASP1, Xorbit
Name
(RefSeq) CLIP-associating protein 1-A
KO
K16578
CLIP-associating protein 1/2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
494817 (clasp1.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
494817 (clasp1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
494817 (clasp1.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
494817 (clasp1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Cnd1
Adaptin_N
Sec7-like_HUS
MMS19_C
Dopey_N
HEAT_DAAF5
PDS5
ParcG
TTI1
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
494817
NCBI-ProteinID:
NP_001088115
Xenbase:
XB-GENE-6466086
UniProt:
Q4U0G1
LinkDB
All DBs
Position
9_10L:56575471..56673609
Genome browser
AA seq
1468 aa
AA seq
DB search
MEQGMDYWLGQIQQKDVGKRLQVGPDLIEYLLDRQKSIDLEQDQTLLDRMVDGLATSWVN
SSNYKVALLGMDILSELVSRLQDRFRTQLGTVLPSLMDRLGDAKDSVREQDQSLLIKIME
QASNPQYVWERMFSGFKHKNFRTREGVCLCLIATLNVYGANSLTLSKIVPHICNLLGDPN
SQVRDAAINCLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGTMILSASDKN
FDDEDSVDGNRPSSASSSASSKAPQTARRGVSLGTARRPGPSSAAAKTGGTAKEGAGALD
EEDFIRAFEDVPNVQIYSSRDLEESLNKIREILSDDKHDWEQRITALKKIRSLLLAGAAE
YDNFFQQLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTVFNLV
PNSAKIMATSGIVAIRLIIRHTHVPRLIPIITSNCTSKSVAVRRRCYDFLDLLLQEWQTH
SLERHVSVLAETIKKGIHDADSEAKIVARKCYWGFHSHFSKEAEHLFHTLESSYQKALQS
HLKNSDSIVSLPQSDRSSSSSQESLNRPLSTKRSPTGSTVSRASSATSKSTPGSLQRSRS
DIDVNAAATSKSKAASGASTAPFISVAALPPGSYASLDGTTSKSDGRIRTRRQSSGSTTS
TASTPADTRGRSRAKVVSQSQPGSRSNSPGKLLGSSYGGIATGPQRVPQMPSSEKRSRIP
RSQGCSRETSPSRIGLDRFGISQQGRIPSAMRVLSSSTDLEAAVADALLLGDSRNKKKPV
RRRYEPYGMYSDDDANSDASSACSERSYSSKNGGIPHYLRQTEDVAEVLNHCASSNWSER
KEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDL
QDWLFILLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNL
KVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFE
LNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNSSMGSPSNTIGRTPSRHSSSRASPLT
SPTNCSHGGLSPSMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQVDLNEPVRRDSKKE
SELGSCDVGIASPASDLRGGTDMVEGGRMALDNKTSLLNTQPPRAFTGPRGREYNPYAYS
DSINSYDKTALKEAVFDDDMDQLRDVSIDHSDLVADLLKELSNHNERVEERKGALCELLK
ITREDNLAVWEEHFKTILLLLLETLGDKDHAIRALALRVLREILRNQPARFKNYAELTIM
KTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIIQTADYPINLAAIKMQAKVI
ERISKESLHQILPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSK
MKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggaacagggaatggactactggctggggcagatacagcagaaagatgtgggcaagagg
ctccaggttggacccgacttgatagaatacttgttggatagacagaagtccatagacctg
gaacaggaccagactctgctcgacagaatggtcgatggacttgccacttcctgggtgaat
tctagtaattataaggtggccctgctgggcatggatattctgtccgaacttgtttcccgg
ctgcaggatcgattcagaacacagcttggcacagtgttaccaagtttgatggaccgatta
ggggatgccaaggactctgtacgagagcaagaccagagcctcctgataaagataatggaa
caggcctccaacccacagtatgtgtgggaacggatgttttcgggattcaaacataagaat
ttccgtacgcgggaaggagtctgcctctgccttattgccaccctcaatgtgtatggagcc
aacagtctgacacttagtaagattgtaccgcatatatgtaaccttctgggggatcctaat
agccaggtccgagatgctgcaataaattgcctcgtagagatctacagacatgtaggggaa
cgcgtccgagctgatctcagtaagaaagggctgccacaatcacgactgaatgtaattttc
accaaattcgatgaggtacagaaatcgggaaccatgatcctctccgcatccgataaaaac
tttgatgatgaagattctgttgatggcaaccgaccctcatcggccagttcttctgcctct
tctaaagcccctcaaaccgcccgcagaggggtgagcttagggactgcccgcaggccagga
ccctctagtgctgcagccaagacaggaggaactgccaaagaaggcgcgggagccttggat
gaggaggattttattcgagcatttgaagatgttccgaatgtccagatatattcaagcaga
gacctggaggagtccttgaacaagatccgagaaatcctctctgatgacaaacatgactgg
gagcagcggatcactgctctgaagaagatccgatctttgcttttggcgggggcggcagaa
tatgataatttcttccagcagctccgtctgcttgatggagcctttaaactctctgccaag
gacttgcgttctcaggttgtacgggaggcttgtatcactctgggacacttatcctcagtt
ctggggaataaatttgaccatggtgcagaagcaatcatgccaacggtcttcaatctggtc
cccaacagtgccaaaatcatggccacctctggcattgtagccatccggctaatcatacgt
catacacacgtcccaaggttgatccccatcatcaccagtaactgcacctccaagtctgtc
gctgtcagaagacgctgctacgattttttggatctgcttctccaagaatggcaaactcac
tcactcgaaaggcacgtatctgtgttagcagagaccatcaaaaaggggattcatgatgcg
gattcagaagcaaagatcgtcgcaagaaagtgctactgggggttccacagtcatttcagt
aaggaggcagagcacttgttccatacactggagtcttcctaccagaaagccctgcagtct
catctgaagaactctgacagtatcgtctctttgccccagtctgaccgatcctcctccagt
tcccaggagagcctcaaccgaccactttcgactaaaagaagccccacaggcagcactgtg
tctagagcatcgtcagctacttccaaatccacccccgggtccctgcagcgctctcgtagt
gacattgatgtgaacgcagcggccacttctaaatctaaggcagcatcaggagcctccact
gctccattcatttctgttgccgcactgccacctggatcctatgcgtcactggatggtacc
acatctaaatcggatggccgtattcgcactagaaggcagagttccggcagcaccaccagc
acggcctctaccccagcagacacccgtggacgcagccgagccaaagtcgtgtcacagtca
cagcctggaagccggtccaactcgccaggaaagctcctggggagtagctatggtgggata
gcgactggcccacagagggtcccccagatgccctcctctgaaaagagaagcaggatcccc
cggagccaggggtgcagcagggagaccagcccaagcaggattggcttagatcgttttggg
atcagccaacaaggaagaatcccttcggcaatgcgtgtcctgagttccagcacagatctg
gaggcagctgttgcagatgctctgttgctgggagattccaggaataagaagaagccagtt
cggaggcgttatgagccatacggcatgtactctgatgatgatgccaatagtgacgcatca
agcgcttgctcagagaggtcctacagctccaagaatggtgggatccctcactacctgcgc
cagacagaagatgtggctgaggtgctgaatcattgcgccagctccaactggtctgagaga
aaggaagggctccttggactgcagaacctgctcaagagccagaggacgctgagccgagtg
gaactgaaaaggctctgcgagatcttcacccggatgtttgcggatcctcacagcaagaga
gtgttcagcatgttcctggagacccttgtggactttgtcattattcacaaagatgacctg
caggactggctctttatcctcctgacccagctgctgaagaaaatgggtgccgacctgctg
ggctctgtccaagccaaagtgcagaaggcactggatgtgacaagggattctttccccttt
gaccagcagtttaacatcctgatgagattcatagtggatcagacccagactcccaacctc
aaggtgaaagttgccatactgaagtacattgagtcattggcccggcagatggacccaaca
gactttgtcaactccagtgagacacgtctggctgtgtccagaatcatcacttggacaact
gagccaaagagttctgatgtcaggaaggcggcgcagattgtcttaatctctctgtttgag
ctgaacaccccagagttcaccatgttgctgggagccctacccaaaaccttccaagatgga
gccacaaaactcctgcacaaccacctcaagaactcaagtaacagtagcatgggatcccca
agcaacaccattggccgaactccttccagacactccagcagccgagccagtccactaaca
tcgcccaccaactgttcccatggcggcctctctcccagcatgctggattatgacactgaa
aacctgaactctgatgaaatctacagctccctccgaggggtgacagaggccatcgagaag
ttcagcttccgcagccaagtggatctcaatgagcctgtgagacgggacagcaaaaaggaa
agcgagctggggtcctgtgatgttggtatcgcttctccagccagcgatctccgtgggggc
acagacatggtggaaggaggtagaatggcacttgataacaagacttccctgctgaatacg
cagccgccacgggcattcacagggccccgtgggcgggaatacaacccttatgcctattcc
gactctattaacagctacgataagacagcgctaaaggaagccgtgtttgatgatgacatg
gatcagctgcgtgatgtgtccatagaccactcagacctcgtggccgacctcctcaaagag
ctgtccaatcacaacgagcgggttgaggagaggaaaggggccctttgtgagctgctgaag
atcacgagagaagacaacctggctgtttgggaggaacatttcaagacaattctgctcctc
ctgctggaaactctgggtgacaaagatcatgcaattcgcgccttagcattgagggtacta
agagaaatcctgcgtaaccaaccggcccggtttaagaattatgctgagctgaccataatg
aagacactggaagcccataaggactctcataaagaggtcgtccgagctgcagaagaagca
gcatcaactctggccgggtccatccaccccgagcagtgcatcaaagttctgtgccccatc
atccagacagctgactaccccatcaacctcgctgccatcaaaatgcaagcaaaggtcatt
gagaggatttccaaggagtccctgcaccagatcctcccggatatcattccaggcttgtta
cagggctatgataatacagagagcagcgttcgcaaggcaagtgtcttctgcctggtagcc
atctattctgtgattggagaagagctgaaaccatacctggcgcaactgactggcagtaag
atgaagctgctgaacctgtatataaaaagagcgcagacaacaaacagtaacagcagctcc
tcgtcggacgtctccacgcacagttag
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integrated database retrieval system
