Xenopus laevis (African clawed frog): 494830
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Entry
494830 CDS
T01010
Symbol
gtf2b.S, gtf2b, gtf2b-a, gtf2b-b, tf2b, tfiib
Name
(RefSeq) general transcription factor 2B S homeolog
KO
K03124
transcription initiation factor TFIIB
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
494830 (gtf2b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
494830 (gtf2b.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
494830 (gtf2b.S)
Prokaryotic type
Archaeal type
TFB
494830 (gtf2b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
494830
NCBI-ProteinID:
NP_001088125
Xenbase:
XB-GENE-866352
UniProt:
Q63ZH4
LinkDB
All DBs
Position
4S:85164133..85175794
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AA seq
316 aa
AA seq
DB search
MASTSRVDALPKVTCPNHADALLVEDYRAGDMICSESGLVVGDRVVDVGSEWRTFSNDKA
AKDPSRVGDAQNPLLSGGDLTTMIGKGTGAASFDEFGNSKYQNRRAMSSSDRAMMNAFKE
ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETNVDLITTGDFMSRFCSNLGLTKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagtcgcgtcgatgcacttccaaaggtcacttgcccaaaccatgctgat
gcccttttggtagaagattatagagctggggatatgatctgttcagagagcggattggta
gtgggtgatcgcgttgttgatgttgggtctgaatggagaacatttagcaatgacaaagct
gctaaagacccttctcgagttggagatgcacaaaatcctctcttaagcggcggagacttg
actacaatgattggcaaggggactggcgctgcaagctttgatgaatttggaaactccaaa
tatcaaaatcgcagagcaatgagcagttctgacagagcaatgatgaatgctttcaaagaa
ataacaactatggcggacagaattaaccttcctcgcaacatagttgatcggactaataac
ctatttaagcaggtatatgagcaaaaaagtctaaaagggaggagtaatgacgctatagct
tctgcatgcctctatatcgcctgcagacaggaaggagtccctagaacatttaaagaaatc
tgtgctgtatcaagaatttccaagaaggaaattggcagatgttttaaactcatcctgaaa
gctcttgagacaaatgtggatttgataactactggagactttatgtccaggttctgctca
aatctgggccttaccaaacaggtgcagatggcagctactcacattgcacgtaaagctgtg
gaactagacttggttccagggagaagtccaatctctgtggcagctgctgccatttacatg
gcatctcaagcatctgctgagaagagaacccaaaaggaaattggcgacattgcaggagta
gcggatgtgaccatcagacaatcttacagactaatatacccacgagcccctgacttgttt
cctgcagacttcaagtttgacacaccagttgacaaattacctcaactataa
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