Xenopus laevis (African clawed frog): 494856
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Entry
494856 CDS
T01010
Symbol
nectin1.L
Name
(RefSeq) nectin-1 isoform X2
KO
K06081
poliovirus receptor-related protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03266
Virion - Herpesvirus
xla04514
Cell adhesion molecules
xla04520
Adherens junction
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
494856 (nectin1.L)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
494856 (nectin1.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
494856 (nectin1.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
494856 (nectin1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
494856 (nectin1.L)
04090 CD molecules [BR:
xla04090
]
494856 (nectin1.L)
Cell adhesion molecules [BR:
xla04515
]
Immunoglobulin superfamily
Nectin family
494856 (nectin1.L)
CD molecules [BR:
xla04090
]
Proteins
494856 (nectin1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
ig
I-set
Ig_2
Insulin_TMD
Ig_C17orf99
MGC-24
Syndecan
TM_ErbB1
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
494856
NCBI-ProteinID:
XP_018080065
Xenbase:
XB-GENE-6488374
UniProt:
A0A8J0T8M3
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All DBs
Position
7L:81608038..81715223
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AA seq
514 aa
AA seq
DB search
MLLPWIMAPRRNGRCLCWPLTISVFLASVFQGVQSQMVLVNETVSGYTGDDVMLHCNFVN
PLPSVKITQVTWQKSTNGSKQNVAIYNPAMGVSILPPYKERVSFLSPSFRDGTIKLTRLQ
LEDEGSYICEFATFPTGNRESQLNLTVLSKPVNHMEGTSNQLIAVPGSTKKVVVATCISA
NGKPPSSVNWETKLKGEPEYQEIKNDNGTVTVISRYLLVPNREAHQQPLTCVINYQTERY
TQTTLLSVQYEPHVTIEGFDGNWYVRRPEVKLTCTADANPPPSLYEWRMANGSLPDNAVV
NNNTLHFRGEVTYGFSGTYICEAKNAVGSRTGQIEVNVTEFPFTPTTPGRLDRRESSTFP
TAIVGGAVGGVVLVLAVSVLIFVVLRKRHHTFKGDYNTKKHVYGNGYSKAGVAQHPPMAQ
SLQYPEDSDDEKKPGPVGSSSYEEEEDDEGLNRHKLGQKFDDESKRPYFTVEEGDRRCYN
EDRTLGFQYEPDDMPDNLVPQNDGSFISKKEWYV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcccgtggattatggctcccaggcggaatggccgctgcctgtgctggcctctc
actatcagcgtgttcttggcatcagtcttccaaggagtacagtcacagatggtgctggta
aatgagacagtttctggatacaccggtgacgatgtcatgcttcattgtaattttgtaaat
cctctacccagtgtaaagataactcaggtcacatggcagaagtccaccaatggctcaaag
caaaatgtggccatctacaaccctgcaatgggagtgtctatccttcctccttacaaagaa
cgtgtatccttcctaagcccctcttttcgggatggcacaatcaagctgacccgattgcag
ctggaagatgaaggatcatacatctgtgaatttgctactttccctacaggaaaccgagag
agtcagcttaatcttactgttctatccaaacctgtcaatcatatggaaggaacatcaaac
cagctgattgcagttccaggttcaactaagaaggttgtcgttgccacctgcatatcggcc
aacgggaagcctcccagcagtgtgaactgggaaaccaagctgaagggtgaacccgagtat
caagagatcaagaatgataatgggacagtcacagtaatcagccgctacctgctggtacca
aaccgagaagcccaccagcaaccactaacttgtgttattaactatcagaccgaacgatac
acacagacaactcttctcagtgttcagtatgaaccacatgttactattgaaggttttgat
gggaattggtatgtaagaagaccagaagttaaactgacctgcacagcagacgccaaccct
cctccttctctatatgagtggagaatggccaatggctcactgccagataatgccgtcgta
aataataacactctgcactttcgaggggaggtcacctacggtttctctggaacgtacatt
tgtgaagccaaaaatgccgttggcagtcgtacgggtcaaattgaagttaatgtgacagaa
ttccctttcaccccaactactcctgggagactggaccggagagagtcctccacatttcca
acagcaatcgtgggaggcgcagtgggaggagtcgttcttgtgcttgcagtgtcagtactg
atatttgtcgtactgcgaaaaagacatcacaccttcaaaggagactataacaccaagaaa
cacgtatatggaaatggttatagcaaggcaggagtagcacaacacccaccaatggcacag
agccttcagtatcctgaggactctgatgatgagaagaagccaggtccagtgggaagcagc
agctatgaagaggaggaggatgatgagggtctgaatagacataagctgggtcaaaaattt
gatgatgagtctaagcgtccatacttcactgtggaggagggtgatcgtcgatgttataat
gaagacagaacgctaggattccagtatgaaccagatgacatgcctgacaatttggtgccc
caaaacgatggttctttcatctccaagaaagagtggtatgtgtga
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