Xenopus laevis (African clawed frog): 494856
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Entry
494856 CDS
T01010
Symbol
nectin1.L
Name
(RefSeq) nectin-1 isoform X2
KO
K06081
poliovirus receptor-related protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03266
Virion - Herpesvirus
xla04514
Cell adhesion molecule (CAM) interaction
xla04517
IgSF CAM signaling
xla04520
Adherens junction
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
494856 (nectin1.L)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
494856 (nectin1.L)
04517 IgSF CAM signaling
494856 (nectin1.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
494856 (nectin1.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
494856 (nectin1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
494856 (nectin1.L)
04090 CD molecules [BR:
xla04090
]
494856 (nectin1.L)
Cell adhesion molecules [BR:
xla04515
]
Immunoglobulin superfamily
Nectin family
494856 (nectin1.L)
CD molecules [BR:
xla04090
]
Proteins
494856 (nectin1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
ig
I-set
Ig_2
Insulin_TMD
Ig_PVRIG
Ig_C17orf99
Syndecan
MGC-24
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
494856
NCBI-ProteinID:
XP_018080065
Xenbase:
XB-GENE-6488374
UniProt:
A0A8J0T8M3
LinkDB
All DBs
Position
7L:81608038..81715223
Genome browser
AA seq
514 aa
AA seq
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MLLPWIMAPRRNGRCLCWPLTISVFLASVFQGVQSQMVLVNETVSGYTGDDVMLHCNFVN
PLPSVKITQVTWQKSTNGSKQNVAIYNPAMGVSILPPYKERVSFLSPSFRDGTIKLTRLQ
LEDEGSYICEFATFPTGNRESQLNLTVLSKPVNHMEGTSNQLIAVPGSTKKVVVATCISA
NGKPPSSVNWETKLKGEPEYQEIKNDNGTVTVISRYLLVPNREAHQQPLTCVINYQTERY
TQTTLLSVQYEPHVTIEGFDGNWYVRRPEVKLTCTADANPPPSLYEWRMANGSLPDNAVV
NNNTLHFRGEVTYGFSGTYICEAKNAVGSRTGQIEVNVTEFPFTPTTPGRLDRRESSTFP
TAIVGGAVGGVVLVLAVSVLIFVVLRKRHHTFKGDYNTKKHVYGNGYSKAGVAQHPPMAQ
SLQYPEDSDDEKKPGPVGSSSYEEEEDDEGLNRHKLGQKFDDESKRPYFTVEEGDRRCYN
EDRTLGFQYEPDDMPDNLVPQNDGSFISKKEWYV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcccgtggattatggctcccaggcggaatggccgctgcctgtgctggcctctc
actatcagcgtgttcttggcatcagtcttccaaggagtacagtcacagatggtgctggta
aatgagacagtttctggatacaccggtgacgatgtcatgcttcattgtaattttgtaaat
cctctacccagtgtaaagataactcaggtcacatggcagaagtccaccaatggctcaaag
caaaatgtggccatctacaaccctgcaatgggagtgtctatccttcctccttacaaagaa
cgtgtatccttcctaagcccctcttttcgggatggcacaatcaagctgacccgattgcag
ctggaagatgaaggatcatacatctgtgaatttgctactttccctacaggaaaccgagag
agtcagcttaatcttactgttctatccaaacctgtcaatcatatggaaggaacatcaaac
cagctgattgcagttccaggttcaactaagaaggttgtcgttgccacctgcatatcggcc
aacgggaagcctcccagcagtgtgaactgggaaaccaagctgaagggtgaacccgagtat
caagagatcaagaatgataatgggacagtcacagtaatcagccgctacctgctggtacca
aaccgagaagcccaccagcaaccactaacttgtgttattaactatcagaccgaacgatac
acacagacaactcttctcagtgttcagtatgaaccacatgttactattgaaggttttgat
gggaattggtatgtaagaagaccagaagttaaactgacctgcacagcagacgccaaccct
cctccttctctatatgagtggagaatggccaatggctcactgccagataatgccgtcgta
aataataacactctgcactttcgaggggaggtcacctacggtttctctggaacgtacatt
tgtgaagccaaaaatgccgttggcagtcgtacgggtcaaattgaagttaatgtgacagaa
ttccctttcaccccaactactcctgggagactggaccggagagagtcctccacatttcca
acagcaatcgtgggaggcgcagtgggaggagtcgttcttgtgcttgcagtgtcagtactg
atatttgtcgtactgcgaaaaagacatcacaccttcaaaggagactataacaccaagaaa
cacgtatatggaaatggttatagcaaggcaggagtagcacaacacccaccaatggcacag
agccttcagtatcctgaggactctgatgatgagaagaagccaggtccagtgggaagcagc
agctatgaagaggaggaggatgatgagggtctgaatagacataagctgggtcaaaaattt
gatgatgagtctaagcgtccatacttcactgtggaggagggtgatcgtcgatgttataat
gaagacagaacgctaggattccagtatgaaccagatgacatgcctgacaatttggtgccc
caaaacgatggttctttcatctccaagaaagagtggtatgtgtga
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