Xenopus laevis (African clawed frog): 494988
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Entry
494988 CDS
T01010
Symbol
lamb2.L, lamb1, lamb2, lams
Name
(RefSeq) laminin subunit beta 2 L homeolog precursor
KO
K06243
laminin, beta 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
494988 (lamb2.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
494988 (lamb2.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
DUF2959
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
494988
NCBI-ProteinID:
NP_001088164
Xenbase:
XB-GENE-5935979
UniProt:
Q5XHI6
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Position
4L:complement(138142675..138231008)
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AA seq
1783 aa
AA seq
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MAPSLWPFGLVITALVTGSVSQIPDQQHGCSQGSCYPATGDLLVGRADKLKATSTCGLRR
AQPYCIVSHLQDEKKCFVCDSRKPYNPLYNPISHRIENVITTFAPQRKKAWWQSENGVSE
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWQIYRYFAHDCTSSFPNVSRN
TLRKVDDVICESRYSDIEPSTEGEVIYRVLDPAIPIRDPYGPNIQNLLKITNLRINFTKL
HTLGDNLLDSRVEIKEKYYYALYELVVRGNCFCYGHASECAPIEGLSRDFEGMVHGRCVC
KHNTKGLNCEQCDSFFNDLPWRPAEGRSTNACKKCNCNNHSRKCHFDMAVYLSTGNVSGG
VCDDCVHNTMGRNCEFCKPFFYKDPSKDIRDSAVCKDCDCDPDGSLDGGLCDAQDSPALG
LIAGQCRCKDYAEGPRCDRCKTGFFGLSANNFQGCQRCQCDPRGTISGGAQCDPISGDCF
CKRFVTGRTCNQCLPEFWALSHDLHGCRSCDCDVGGAWDNHCAMETGQCRCRSHMVGRQC
NQVKSGYYRIHLDHYTYEAESAVHRQGCSVLERERPIGRQATWTGPGFALVPEGGILEFQ
ISNIPYSMEYDVIIRYEPQLSAMWEQVKISIIRPGPIPTSSPCGNTIPADDQMVASLPPG
TRHVVLPQPVCLERGVSYTIRLEFSRYSSRERVPGASILVDSLVLAPRYSAMEMFIAGDP
ASIQRKDTFERYRCHSNSGNVIKSPTTEVCSGLITSMSAVIHEGALPCSCDPQGSLSSEC
DPNGGQCQCKTNVIGQRCDRCAPGTYGFGPTGCRVCECNKEGSSQNFCDQRTGQCPCRQG
AFGSRCDRCQPGHWGFPNCRQCQCNSHSEECDQRTGACLNCRDHSTGDRCERCIAGFFGN
PVLGSGDHCRPCPCPEGPTSGRHFAASCQQDPRSRQVICNCKQGYSGVRCDECSPGFFGN
PFQTGGRCLLCQCNNNIDMTDIGACDRRSGQCLKCKFNTEGRFCEHCRIGFYGDASRHNC
RKCACNYLGTEPSQCPSREDCMCDRTSGQCHCLPNVMGQNCDRCSPNFWNLASGKGCQPC
NCDPNHSFSLACNEFTGKCQCRPGFGGLTCTDCQENYWGNPNIQCRACDCDRRGIKAAQC
NRATGHCSCRAGVSGVRCDQCARGFSGQFPDCQPCHQCFGDWDRIVQDLATRTKSLVQRG
KDIQLSGIAGVYQKNFRDIEKKLAKARAIVIARNATVESVTQLMKIMDDLRNKINESTEA
LTQLEVELTTVQDENFDANHDLAELERNARSLNMTAKERSHQLDVLKNSNFLGAYDSIQQ
SHAKSRQAEKQANNATTNVPSPVSHSARTREKAQQLITHKRDDFNRKNAANRRALNDLAA
KTDTLDMKKINEKVCGAPGDAPCSESPCGGAGCRDDEGNRHCGGLNCNGAVATADNALGR
ARHAEEELQKALGEVEVLFRKVAEAKVKADRAKQRAQATLDRANETKARVEQSNKELREL
IQQIKDFLNQEGADPDSIEMVASRVLDLTIPATPKQIQRLAEEIKDRVKTLANVDAILDQ
TTADVRKAEQLLHEAKRAKNRAENVKNTAESVKKALDDARRAQNAAEGAIRTANNDIKDT
ERKLTAIQTTTSSAENYLNDAMDRVGNLDKQIDALKMKRANNSLAASRAEESATVALDKA
NDAKKILEGQLADKYKTVQNVVDRKAKNIKDAKTKADQLQDEAKKLLDNAQDKLKRLQDL
EVEYTKNEKLLQDKAKQLNGLEDKMKEILHGINQQIQIYNTCQ
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtccttgtggccatttggccttgtgataactgccttggtcacaggatccgtt
tcccagattcctgaccagcaacatggatgttcccaaggaagctgctaccctgccactgga
gacttgctggtgggccgagcagataaactcaaagctacatcaacctgtggccttcggaga
gctcagccatactgtatagtcagccatttgcaggatgaaaagaaatgctttgtctgtgac
tctcgcaaaccctacaaccccttgtataaccccatcagccaccgcattgaaaacgtcatt
acgacttttgctcctcaacggaaaaaggcatggtggcagtctgaaaatggagtttctgag
gtcactattcagctagatctggaggctgaatttcacttcacccacctgatcatgaccttc
aagaccttcaggccggcggctatgctggtggaacgctctgcagactttgggcgcacctgg
caaatttaccgttactttgcacatgactgtacctcctctttcccaaacgtgtcccgcaac
accctgaggaaggtggacgacgttatctgtgaatcccgttactcagacattgagccctcc
acggaaggagaggtcatttacagagttttggatccagccatcccgatccgagacccatat
ggtccaaatattcaaaacctcttgaagatcaccaacctccgaatcaactttaccaagctg
cacacattgggtgacaacctcctggattcccgcgtggagatcaaagagaagtattactat
gccctctatgagctggtggtgcgagggaactgcttctgctacggccatgcttccgaatgt
gcgcccatcgaaggattgtccagagatttcgagggcatggtgcatggaagatgcgtgtgc
aaacacaacaccaaggggctcaattgtgagcaatgtgatagtttctttaatgaccttccc
tggagaccagcagaaggacgcagcaccaatgcctgtaaaaagtgcaactgcaacaatcac
tctcgcaagtgtcactttgacatggctgtgtacctgtctaccgggaatgtcagtggtggg
gtgtgtgacgactgtgtgcacaacaccatgggccgtaactgtgaattctgcaagccattc
ttctacaaggatccaagcaaggacattcgggacagtgcagtatgcaaagactgtgactgt
gacccagacgggtcattggacggggggctgtgtgacgcccaagatagcccagctttgggt
ctcattgctggacagtgtcgatgcaaagactatgctgaaggcccaagatgtgatcgatgc
aagaccggattctttggcctgagtgcaaataactttcaaggctgccaaaggtgccagtgt
gacccaagaggtacaatctcgggcggtgcccagtgtgaccctatcagcggtgactgtttc
tgcaaacgctttgtgaccgggagaacatgcaaccagtgtctgccagaattttgggccctc
agtcatgaccttcatgggtgcagatcttgtgactgtgatgttggcggtgcctgggataat
cactgtgctatggagactggccagtgtcgatgccggagtcatatggttggcaggcaatgt
aaccaggtgaaatctggctattaccgaatacacttggatcattacacatacgaggccgaa
tctgctgtgcatcgacagggatgttcagtgttggagagggaacgtccaattggtcgtcag
gccacatggaccggtcctgggtttgccctggttccagagggtggaattctggagttccag
atcagcaacattccctattctatggagtatgatgtcatcatccgctacgaaccccagctt
tcagctatgtgggaacaagtaaaaatatccataattagaccaggtcctatcccaacaagc
agcccatgtggtaataccatcccggctgatgatcagatggtggcatctctaccccctggc
acaaggcatgtggtcctgcctcagccggtttgtctggaacgtggagtcagttacactatt
cgactggagtttagcagatacagttccagagaaagggtacctggagccagcatattggtt
gattcactggtgttggctcccagatactcggccatggaaatgttcatagccggggacccc
gcgtcaatacaacgcaaggacacttttgaacgttatcgctgccacagcaacagtggaaat
gtgataaagtcacctaccaccgaggtgtgctccggcctcatcacaagcatgtcggctgtc
attcacgaaggagccctgccctgcagctgtgacccacagggatctctgagctccgaatgt
gaccccaatggtgggcagtgccagtgtaaaactaacgtcattgggcagcgctgtgaccga
tgtgcaccaggaacttatggatttggaccaaccgggtgccgagtctgtgagtgcaataaa
gagggatccagccagaatttctgcgaccagcgcacgggtcagtgtccttgccggcaagga
gcatttggttccaggtgcgaccgctgccagcctggccactggggcttcccgaactgccgg
cagtgtcagtgcaacagtcattcggaagagtgcgaccagagaacaggggcgtgtctgaac
tgcagagaccacagcacaggagacagatgtgagagatgcattgcaggcttttttggaaac
ccagtactgggatcaggggatcactgccgcccctgcccctgcccagagggacccaccagt
gggcgacatttcgcagcatcctgtcaacaagacccccgttcaagacaagtcatctgtaac
tgcaaacagggatactcaggtgttcgctgtgatgaatgttctccagggttctttggaaat
ccattccagactgggggccgctgtcttctttgccagtgtaacaacaacatcgatatgaca
gatattggggcttgcgaccgtcgcagtgggcagtgcctcaaatgcaagtttaacaccgaa
gggaggttttgtgagcactgtcgaattggcttttatggtgatgcatcaaggcacaactgc
agaaagtgtgcatgtaactaccttgggacagaaccaagccagtgtccttcacgggaagac
tgtatgtgtgacagaacaagtggccagtgccattgcttgccaaatgtcatgggacagaac
tgcgaccgttgcagtcccaacttttggaacctggcaagcggcaagggctgtcagccgtgc
aactgtgaccccaaccattccttcagcctagcctgcaatgagtttactggaaaatgtcaa
tgccggcctggatttggtggtctgacctgtacagattgccaggaaaattactggggaaat
cccaatattcagtgcagggcttgtgattgtgatcgtcgtggtatcaaggcagcacagtgt
aacagagccactggtcattgctcctgccgtgctggagtgtcaggagtgcgttgtgaccag
tgtgcccggggattttccggccagtttcctgattgtcagccctgccatcagtgttttgga
gactgggaccgaatagttcaagatctggccactcgtactaagagcctggttcaaagaggc
aaggacatccagctgagtgggatagccggagtgtaccaaaagaatttccgtgacattgaa
aagaaacttgccaaggctcgggccattgtcattgctcgtaatgccactgtggagtcagtg
actcaactaatgaagatcatggatgacctgcggaataaaattaatgagtcaacggaggct
ctcacgcagttagaggtggagctgacgactgtgcaggatgagaactttgatgctaatcat
gatctggcggagctggaaaggaatgctcggagtttaaacatgactgccaaggagaggtcc
catcagttggatgttctaaagaactccaactttctgggtgcatatgacagcatccagcaa
tctcatgcaaaatctagacaggctgaaaaacaagccaataatgccaccactaatgttccc
agccctgttagccattcggccaggaccagggagaaggcccagcagctaatcacccacaag
cgtgacgatttcaacaggaagaatgcggctaatcgtcgggcacttaatgatttggcagct
aaaacagacacccttgacatgaagaagatcaatgagaaggtctgtggtgctccaggagat
gccccatgctctgagagcccttgtggtggagctggctgtcgtgatgatgaggggaacaga
cattgtggtgggttgaactgtaatggagctgtggctactgctgacaatgccttgggtcga
gcacgccatgctgaagaagaacttcagaaagcactgggagaagtagaagtgctttttcga
aaggtggctgaagcaaaggtaaaggcagacagagcaaaacagagggcacaggccaccctc
gacagagccaatgaaacaaaggcaagggtggaacagtccaataaggagctgcgggaactc
atccagcaaatcaaagactttctgaaccaggaaggtgcagacccagacagcattgagatg
gtggcaagccgtgtcctggatctcacaatcccagcaaccccaaagcagatacaacgtctt
gctgaagagatcaaggaccgagtgaaaactcttgcaaatgtggatgccattctggaccaa
accaccgctgacgtgcgcaaagcagaacaattgctgcacgaagccaaacgggccaagaac
cgagctgaaaatgtaaagaacacggcagagtctgttaaaaaggccctggatgatgctagg
agagctcagaatgctgcagaaggtgctatccgaactgccaataatgatatcaaagacacg
gagaggaaattaacagcaattcagacaacaacatctagtgcagagaattatctaaatgat
gctatggatcgagtgggaaatctggataaacaaattgatgctctgaaaatgaaaagggcc
aacaatagcctggctgccagccgagcagaagaatctgccactgtggcattggacaaagcc
aatgatgccaagaagatcttagaagggcaactcgcggacaaatacaaaactgttcagaat
gtcgttgatcggaaagccaagaacattaaagacgcaaagacaaaagcggaccaacttcaa
gatgaggcaaagaaactcttagataatgcacaggataaactaaagagattgcaagatttg
gaagttgaatatacgaagaatgagaaacttctacaggacaaagcaaaacagcttaatggc
ctagaagacaagatgaaggaaatcttacatggaattaaccaacagattcagatttataat
acgtgccagtaa
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integrated database retrieval system
