Xenopus laevis (African clawed frog): 495014
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Entry
495014 CDS
T01010
Symbol
rab40c.S, rab40, rab40c, rab40c.L, rarl, rasl8c
Name
(RefSeq) uncharacterized protein LOC495014
KO
K07928
Ras-related protein Rab-40
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
495014 (rab40c.S)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xla04031
]
495014 (rab40c.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
495014 (rab40c.S)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
495014 (rab40c.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
495014
NCBI-ProteinID:
NP_001088189
Xenbase:
XB-GENE-6254548
UniProt:
Q5XHF6
A0A974H1R7
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Position
9_10S:99110816..99140213
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AA seq
286 aa
AA seq
DB search
MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGASESPYSYSNGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARSYAEKNGMTFFEVSPLCNFNVTESFTELSRIVLMRHGM
EKMWRPNKVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSVAGSSGGATGSGGGSKGNSLKRSKSIRPPQSPPQNCSRTNCKIS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggcacacagggcagcccggttaagagctatgactatctgctgaaattcctgctggtg
ggagatagcgacgtgggcaaaggagaaatcttggagagcctgcaggacggagcatctgag
tcgccgtattcctacagtaatggtattgactacaaaacgactaccattctgctggatggc
cggcgggtcaaactggagctttgggacacctcgggccagggtcgattttgcaccatcttc
cgttcttattccagaggagcccagggaattctcctggtgtatgacatcactaaccggtgg
tctttcgatgggatagatcgctggatcaaagagatagatgagcatgcgccgggggtccct
cggatacttgttgggaaccgactccacttggcgttcaagaggcaggtgcccactgagcaa
gcgcgcagctatgctgagaagaacggcatgaccttctttgaagtcagccccctctgcaac
tttaacgtaacggagtccttcacggagctgtcccgcattgtcttgatgaggcatgggatg
gagaagatgtggagaccaaacaaagtgttcagtctgcaggacctttgttgccgtgccatt
gtctcctgcaccccagtgcacctcattgacaagctacccttgcccgtggccatcaagagt
cacctcaagtccttttccatggccaacggaatgaatgccgtgatgatgcatggacggtcc
tattctgtggctggcagcagcggaggagccacaggaagcggagggggaagcaagggcaac
agtcttaaacgttcaaaatccatccggccgccgcagagcccccctcagaactgctcaaga
accaattgcaaaatatcttag
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