Xenopus laevis (African clawed frog): 495062
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Entry
495062 CDS
T01010
Symbol
jarid2.S, jarid2, jarid2-a, jarid2-b, jarid2.L, jarid2a, jmj, Jumonji
Name
(RefSeq) jumonji and AT-rich interaction domain containing 2 S homeolog
KO
K11478
protein Jumonji
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
495062 (jarid2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
495062 (jarid2.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
495062 (jarid2.S)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
495062 (jarid2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
Motif
Other DBs
NCBI-GeneID:
495062
NCBI-ProteinID:
NP_001088232
Xenbase:
XB-GENE-982170
UniProt:
Q5XH56
LinkDB
All DBs
Position
6S:78903084..79041197
Genome browser
AA seq
1074 aa
AA seq
DB search
MSKERPKRNIIQKRYDDSDGIPWSEERVVRKVLYLSLKEFKTARKRQSDDCINGSFKTPN
GLLLNRKTKGSVQSSENEKDDTSQGSSHTNSVTSSDSEDGPVRKRPRLQAQRKFAQSQPN
SPSTTPIKIVEPLLHPPVTQMSDLSKRKPKTEDFLTFLCLRGSPALPSKMVYFGTSQDEE
EIEDDDDAGFEDTKTTNTSSSCHSTPRKKKMRKHVTNGHVFNGSCKSSKEKETPQRHKSK
EATPGKERNSEQKAESRRESAAANHQPASNMGSSAKGLTANNHHSHLRSAQVLRKQVSKV
NGVTRLSSLGSNAVGAKKTREVRPTPSKTVKYTARVTKGTVTYTKAKKELDKAAKQNHNK
TSSSVHHKISGTTESSNAKTRKQVLSLSTSRANCAAVLNCVKVNGKLNKRTCSREEGRQL
REGLRNSKRRLEEANLPAKAQPLLKKIKVSACLPEVRSKRLAVEKQVLNGHLKKEVPEKM
LERNRPKRASAARSSPVPQPGGKAEDTGCENRSTSPSDSPPKSLDSAKLEKNVGRARCTA
MCEIPVLRPSVKEFHDPLIYIESIRARVEKYGMCTVIPPADWRPECKLNDEMRFVTQIQH
IHKLGRRWGPNVRRLACIKKHLKYQGITLDELPLIGGCELDLAQFFQLINEMGGMQQVTD
LKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHKNLEKDVLREKENLEKK
KGPLESHSDNAYKLHLLPRYEPKNGLINGVVQRNGLRGKLKEMDVQVKNGRRRLFTQEKE
SAEEEPEDKSLFGELHKCIYKGRSVSLTTFYRTARNVMNMCFNKEPTVSEVEQEYWHIVE
QKNCHVAVHCGKVDTKTHGSGFPVGKAEPFSRHGWNLNVLPNNSGSILRHLGAVPGVTIP
WLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEERKLEKVVHTLLQANGTPG
LQMLESNVMISPEMLCKEGIKVHRTVQKSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQ
WTSMGFKTAMEMKRRHIAKPFSMEKLLYQIATVEAKKENSPTLSVISTLLRELR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaaggcccaagaggaatatcatccagaagagatatgatgacagtgatggt
attccatggtcggaagaaagggtggtgcggaaggtgctttacttgtctctcaaagagttt
aagacggcacgaaagagacaaagtgatgactgcattaacggaagcttcaaaactcctaat
ggtctcctccttaatcgaaaaacgaagggatcagtgcaatcatcagaaaatgaaaaagat
gatacatcacaagggtcttcacacaccaacagtgtaacttcatcagactcagaagatggg
ccagtgaggaaaaggccaaggctgcaagcacaaagaaaatttgcccaatcccagccaaac
agtccgagcacaacccccatcaaaattgtggagccattgctacaccctcctgttactcaa
atgtcagacctctccaaacgcaagcccaagactgaagatttcctcacgtttctgtgtctt
agaggttctcctgctttgcctagcaagatggtatattttggaacctctcaagatgaagag
gaaattgaagatgatgatgatgcagggtttgaggacacaaaaacaaccaacacttcatca
tcatgccattcaacacctcgtaaaaaaaaaatgcgaaagcatgtaaccaatggacacgtt
ttcaatgggtcttgtaaatcatcaaaggagaaagagactccccagagacacaaaagcaaa
gaggccacgccagggaaggaaaggaacagtgaacagaaagctgagagccggagagagtct
gctgctgctaaccatcaacctgcttccaacatgggctcctctgccaaagggctcactgct
aataaccatcatagtcatcttcgatcggctcaggtcttaaggaaacaggtttccaaggtg
aatggagtaacccgattatcatcattgggttctaatgcagtcggtgccaaaaagacaaga
gaagtgagacctacaccctccaaaactgtgaagtataccgcaagggtgactaaggggact
gtcacatacaccaaagccaagaaagaactggataaggccgccaaacagaatcacaacaaa
accagttcatctgttcaccacaaaatctcagggaccacagaaagcagcaatgcaaaaact
cgtaaacaggtgctatctctttctacatccagggccaactgtgccgctgttcttaactgt
gtaaaggtgaatggcaaacttaacaaaagaacctgcagtagggaggaagggaggcaacta
agggagggactgcgtaactcaaaaaggcgtctagaagaggcaaaccttcctgccaaggca
cagcctttgctaaagaaaattaaagtatccgcctgcttgccagaggtcagaagcaaaagg
ctagcagtggagaaacaggtgctgaatggacacttaaaaaaagaagtgccagagaagatg
ctggaaagaaataggccgaagcgggcctcagcagccaggagctcaccagttccacaacct
ggtggtaaggcagaagatactggctgtgaaaatcgctctacctcccccagtgattccccc
ccaaaatctctggactctgcaaagctggagaaaaatgttgggagggcaaggtgcacagcc
atgtgtgagatccctgtcctcagaccctctgtcaaggagtttcatgaccccttgatttat
attgaatccatccgagcccgagtggagaagtatgggatgtgcactgtgatcccacctgct
gactggagaccagagtgcaagctgaatgatgagatgagatttgttacacaaattcaacac
atccacaagcttgggcgacgttggggtccaaatgtaaggcgcttggcctgcattaagaag
cacctcaaatatcagggcatcacattggatgaactccctctcataggaggctgtgagcta
gatttagcccagtttttccaacttatcaatgaaatgggtggcatgcaacaagtgactgac
cttaagaaatggaacaaactggctgacatgctacgcatcccgaaaactgcacaggatcgt
ctggcaaagctgcaagaggcctactgtcagtacctgctctcctatgactccctttcccct
gaggagcacaagaatctggagaaggatgttctgcgggaaaaagaaaatctggaaaagaag
aaaggtccactggagagtcactcagacaatgcctataagttacatttgctccccagatac
gagcccaaaaatggactcataaatggagtggtgcaacgcaatggtctcagaggcaagctg
aaagaaatggatgtccaagtgaaaaatggcagacgaagactgtttactcaagaaaaagag
agtgcagaggaagagccagaagacaagagtttatttggtgaactgcataaatgtatctac
aagggaaggtctgtctctctcaccacattctacaggacagcgaggaacgtcatgaacatg
tgcttcaataaggagccaactgtatctgaggttgagcaagaatattggcatattgtggaa
cagaagaactgccatgtagctgtgcactgtggaaaggttgacacaaagactcatggaagt
ggattccctgtgggtaaagcagaacctttttcaaggcatgggtggaatctcaatgtcctt
cctaataattcaggatccatccttagacaccttggtgctgtacctggagtgactattcct
tggcttaatattggcatggttttttctacctcatgctggtctcgggaccaaaatcacctt
ccatatattgactacttacacactggtgctgattgcatttggtattgcattcctgctgag
gaagagcgcaaacttgagaaagtggtacacactctactacaagccaatggtactcctggt
ttgcaaatgcttgaaagtaacgtaatgatttccccagagatgctttgcaaagaggggatc
aaggtgcatcgtactgtacagaaaagtggacagtttgttgtctgcttcccaggatccttt
gtgtcaaaagtgtgctgtggatacagtgtttctgaaactgtgcactttgctaccacccag
tggacaagtatgggctttaaaactgccatggagatgaaacgtcgccacatagcaaagcct
ttctccatggaaaaattactgtatcagattgcaacagtggaagcaaagaaagaaaacagc
ccgactctgagtgtaatttccactctactccgtgagctcaggtaa
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