Xenopus laevis (African clawed frog): 495080
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Entry
495080 CDS
T01010
Symbol
atg4c.S, apg4c, atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
495080 (atg4c.S)
04136 Autophagy - other
495080 (atg4c.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
495080 (atg4c.S)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
495080 (atg4c.S)
03029 Mitochondrial biogenesis [BR:
xla03029
]
495080 (atg4c.S)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
495080 (atg4c.S)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
495080 (atg4c.S)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
495080 (atg4c.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
495080
NCBI-ProteinID:
NP_001088249
Xenbase:
XB-GENE-941092
UniProt:
Q5XH30
A0A974HM28
LinkDB
All DBs
Position
4S:complement(65951261..65979645)
Genome browser
AA seq
450 aa
AA seq
DB search
MEASGTDDVEKLKSKFLSAWHNMKYSWVLKTKTYFKRNSPVFLLGKCYHFKYEDSGVTAD
DCSNSGSDSKEDLSGNVDEFRKDFISRIWLTYRKEFPQIESSSWTTDCGWGCTLRTGQML
LAQGLLVHFLGRDWTWTEALDIFCSESDFWTANTARKLDPSLEKSSPENEEYVSLGKQPL
QNSEKKRYSEDLHRKIISWFADYPLAYFGLHQLVKLGKNSGKVAGDWYGPAVVSHLLRKA
IEESSDPELQGITIYVAQDCTIYNADVYDLQCNKGNEKAVVILVPVRLGGERTNMEYFEY
VKGILSLEFCIGIIGGKPKQSYYFVGFQDDSLIYMDPHYCQSFVDVSIKNFPLESFHCPS
PKKMSFKKMDPSCTVGFYCRNAREFEKAAEELTKVLKSSTKQNYPLFTFVNGHAQDFDFV
CTPVYDQNDLFTEDEKKRLKRFSTEEFVLL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaagccagtggcacagatgatgtggagaaattaaaatctaagttcttatctgcatgg
cacaatatgaaatatagttgggtattgaaaacaaaaacctacttcaagagaaattcacca
gtgtttttacttggcaaatgttaccatttcaaatatgaagattctggcgtaacagccgat
gattgttctaattctggctctgattcaaaagaagacctttctggaaatgtggatgagttt
cggaaggatttcatttccagaatatggcttacttatagaaaagaatttccccaaatagaa
tcatcatcatggacaacagattgtggatggggctgcacattacgtactggtcaaatgctg
ttggcacagggattgctagtacacttcctgggaagagactggacttggacagaggcactg
gacattttctgttctgaatctgacttttggacagcaaacactgctagaaaacttgatcca
tcgcttgagaaatcttcccctgaaaatgaagaatatgtttcattaggcaagcaaccattg
caaaatagtgaaaagaaaagatattctgaggacttgcacagaaaaataatatcctggttt
gcagactacccacttgcctattttggtttacatcaacttgtgaagctagggaaaaattca
ggcaaagtggcaggagactggtatggtccagcagttgtttctcatcttttgaggaaggcg
attgaagagagctcagatccagaactgcagggaataacaatttatgttgctcaggactgt
actatttacaatgctgatgtctatgacctgcagtgtaataagggtaacgagaaggctgtt
gtaattctagttcctgtgagacttggtggtgaaaggaccaatatggaatattttgagtat
gtgaagggaattctaagccttgaattctgcattggaattattggtggcaaacccaagcag
tcctattactttgtggggtttcaagatgacagtttgatctacatggatcctcattactgc
caatcttttgtcgatgtcagcataaagaatttccctcttgagtctttccattgtccttct
cctaagaagatgtctttcaagaaaatggatcccagttgcaccgttggattttactgtagg
aatgctcgagagtttgaaaaggcagcagaagaacttacaaaggtgctgaaatcttcaacc
aagcagaattatcctttatttacctttgtaaatggacatgctcaagactttgattttgtc
tgtactccagtctacgatcaaaatgaccttttcacagaggatgaaaagaaaagattaaaa
agatttagcacagaggagtttgtcttgctttaa
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