Xenopus laevis (African clawed frog): 495090
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Entry
495090 CDS
T01010
Symbol
gcnt1.S
Name
(RefSeq) uncharacterized protein LOC495090
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00512
Mucin type O-glycan biosynthesis
xla01100
Metabolic pathways
Module
xla_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
495090 (gcnt1.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xla01003
]
495090 (gcnt1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
495090 (gcnt1.S)
Glycosyltransferases [BR:
xla01003
]
Glycan extension
O-Glycan
495090 (gcnt1.S)
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Gene cluster
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
495090
NCBI-ProteinID:
NP_001088259
Xenbase:
XB-GENE-17343750
UniProt:
Q5XH18
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Position
1S:122018361..122029620
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AA seq
428 aa
AA seq
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MLTRKLRHCKVKQVNFVFLVALAVATITFVTNHSKYPFFTNMNLELTDLNDIYSVNCTKI
LKGDLEEIQNAKLEMLTVKYKSQQHQLTEDDYINKTNNCESFTRDRKYILYPLSKEEREF
PIAYSIVVYHRIDMLERLLRSIYTPQNYYCIHVDKKSSLSFLNAVKAITSCFENVFIASQ
LESVVYASWTRVQADINCMKDLHNKNAQWKYLINLCGMDFPIKTNQEMVVMLKGLKGQNS
LETERMPPHKEVRWRKHYEIVDNSIRKTETDKTPPPLETPMFSGSAYYIVTRAFVSYILE
NEKIKHFLEWSKDTYSPDEFVWATLQRIPGVPGSVPANSKYDVSDMNAYARFVKWQYLEG
DVAKGAPYPPCAGDHVRSVCIFGAGDLEFMLQKHHLFGNKFDMDVDPTAIKCLEEHLRHK
ALNPELQV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgacacggaaactaagacattgtaaagtaaaacaagtgaactttgtgttccttgtg
gcacttgctgtagcaaccattacatttgtaacaaaccacagcaaatatccattttttacc
aacatgaacctggaactcacagaccttaatgacatttattctgttaactgcaccaagatt
ttaaaaggagatttagaggaaatccagaatgccaaattggagatgttaactgtaaagtac
aaaagccaacagcatcagctcacagaagatgactatattaacaagacaaacaactgtgaa
tccttcaccagagaccgaaaatatatattgtacccactaagcaaagaagaacgtgagttt
cccattgcatactcaatagtggtctaccataggattgacatgcttgagaggctgctgcgc
tccatatacactcctcagaattactactgcattcatgtcgacaagaaatcttctctgtct
tttctgaatgcggtgaaggccataacttcttgttttgaaaatgtgttcattgctagccaa
ttagaaagtgtggtctatgcgtcgtggactagggtgcaggctgatataaattgcatgaaa
gatcttcacaataaaaatgcacaatggaaatacttaataaacctctgtggtatggatttt
ccaataaaaacaaatcaagagatggtagtaatgttaaagggattaaagggtcaaaacagc
ctggaaactgaaagaatgcctccacataaagaagttcggtggcgaaaacattatgaaatt
gttgacaattccattaggaaaactgaaactgacaaaacacctcctcctcttgagacgcca
atgttttctggtagtgcctactatattgtaacgcgagcatttgttagttatattttggaa
aatgaaaagatcaaacattttttagaatggtctaaggatacatacagtcctgatgaattc
gtatgggccactcttcaacgtattcctggagtaccgggttctgtaccagctaatagcaaa
tatgatgtttctgatatgaacgcttatgccagatttgtgaaatggcagtacttagaagga
gatgttgccaaaggagcaccatatcccccgtgtgctggggatcacgttcgttccgtttgt
atattcggggcaggggacttggaatttatgctgcaaaagcatcatttgtttggtaacaag
tttgatatggatgttgaccctactgccataaagtgcctagaggaacatttaagacacaaa
gcactaaatccagaactgcaagtataa
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