Xenopus laevis (African clawed frog): 495097
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Entry
495097 CDS
T01010
Symbol
ddx54.L, ddx54
Name
(RefSeq) DEAD-box helicase 54 L homeolog
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
495097 (ddx54.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
495097 (ddx54.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
Helicases
495097 (ddx54.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
495097
NCBI-ProteinID:
NP_001088266
Xenbase:
XB-GENE-1011581
UniProt:
Q2VPF9
A0A974E0Q5
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All DBs
Position
1L:complement(157108055..157121433)
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AA seq
846 aa
AA seq
DB search
MAQKKRKAQRSRKCCQRQDSDDSDKGEFRVKAAPQKDDGVHLPAFPTADAGSDSEAEPDT
RELVRAQNKKKKKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKVVPVILDGKDVVAMAR
TGSGKTACFLIPMFEKLKAHSAQTGVRGLILSPTRELALQTLKFTKELGKFTGLKTALIL
GGDRMEDQFAALHENPDIIIATPGRLMHVAIEMNLKLRSVEYVVFDEADRLFEMGFAEQL
QEIISRLPETRQTLLFSATLPKMLLEFARAGLTEPVLIRLDVDTKLSDQLKLSFFNVRVE
DKPAVLLHLLRCVVKPQEQTVIFVATKHHAEYLRELLDMQGIPCSHIYSSLDQTARKINL
GLFLHGKVRALLVTDVAARGIDIPMLDNVINYNFPPKAKLFLHRVGRVARAGRSGTAYSF
IAPDEIPYVYDLHLFLGRPLKLANAQNIETEADTDGVLGRVPQSLIDDEDALLITDRERS
LELQNLHQVSENAYKQYIKSRPTPSPESIKRVKDANYNLLGVHPLFWSQLGGEEMQRLKF
VDGIKSYKSKATIFEINSTSKTSASEVMRAKRNHDGKLIAKFQRLQEEKTSATVTSGISG
LCCKQESDEENIEGVFSQVIGKRKMTDKDEAEGSKKRKGGASQDSNYYIPYRPKDFESER
GLSIGGSSFEQAAAGAVMDLLGDHTEDLKKNKQVLKWDRKKKKFVGTGGQEDKKKIKTES
GRLISSSYKKNLYEGWKKKYKIDDQDSEEEETNQRTAAGRRKGRGGRGSQRHSNSQSSGP
QGKAKSELRSKQQILKMRKAQSKQNFLQKGGLKKMKTKTRHLAHQMKKSAFGRGKSNGFK
KGKTRK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaaaaaacgtaaggcgcagaggtctcggaaatgctgtcaacgacaagatagc
gacgatagcgataaaggggaatttcgtgtcaaagctgcaccccaaaaggatgatggagta
caccttccagcatttcccactgcagatgcaggttcagattcagaagcagaaccggacacc
agagagctggttcgagcacagaacaagaagaaaaagaagtctggcgggtttcagtccatg
ggtctaagttatcccgtctataaaggagtgatgaagaaaggttacaaggttcctactccc
atccagagaaaggtggttccagtcattcttgatggtaaggatgtggtagcaatggctaga
actggcagtggaaagactgcttgtttccttatccctatgtttgagaagctgaaggctcac
agtgcccaaacaggagttcgtgggcttatcctttccccaactagagagcttgccttgcag
actctgaaatttactaaagagcttggtaaattcactggactgaagactgctctgattttg
ggtggtgacagaatggaagatcagtttgcagctctgcatgaaaatccagatataattatt
gctactcctggtcggctgatgcatgtggcaattgagatgaacctgaagcttcgcagtgtg
gaatatgtagtgtttgatgaagctgacagactctttgagatgggatttgcagaacagctg
caagagataatctctcgactaccagagacccgccagacacttcttttctctgccactctg
cccaagatgcttctagagtttgccagagctggccttactgagcctgtgctaatacggttg
gatgttgacacaaagctaagtgaccagctgaagttgtccttctttaacgtgcgtgtagag
gacaaacctgctgtgcttctgcatctactgcgctgtgttgtgaagcctcaagaacaaaca
gtcatttttgttgccactaagcaccatgcagaatacctgagagagttgctggacatgcag
ggaattccatgctctcacatatacagttctctggatcagacagccaggaagataaacctg
ggcctctttttgcatgggaaggtgcgtgcgttgttggtcactgatgtggcagctcgaggt
attgatataccaatgttggacaacgtcataaactacaacttccctccaaaggccaagctt
ttcctgcaccgcgttgggcgtgtggcaagagcaggacgaagtgggactgcttactcattc
attgctcctgatgaaattccctatgtgtatgatctccatctctttcttgggcgccccctt
aaactggcaaacgcacaaaatattgagacagaggcagacacagatggtgtactggggaga
gtaccacagagtttgattgatgatgaggatgccttgcttattactgatcgggagcgttca
ctggagctgcagaacttgcaccaagtgtccgagaatgcctacaaacaatacattaaatcc
aggccaactccctctcctgagtccatcaaacgcgtcaaagatgctaactataacttgttg
ggggttcacccactcttttggtctcagcttggtggagaagagatgcagaggctgaagttt
gttgatggcatcaaatcttacaaatctaaagcaaccatatttgaaattaactctactagt
aagacctctgcaagtgaagttatgcgagccaagagaaatcacgatgggaaacttatcgct
aagtttcagcggctgcaagaggagaaaacaagtgcaactgtgactagtgggatatccggc
ctttgctgcaaacaagagagcgatgaggaaaacatagagggggtattttcacaagtgatt
gggaagaggaaaatgactgacaaagatgaagctgaaggcagcaagaaaagaaaaggagga
gcttctcaggactccaactattacataccatacagaccaaaggattttgagagtgagagg
gggctcagcattgggggcagcagctttgagcaggcagccgctggggctgtaatggaccta
ttgggagaccatacggaagatctgaaaaagaacaaacaagtattgaagtgggatcgaaag
aaaaagaagtttgtgggaacaggtggacaggaagacaaaaagaaaataaagactgagagt
gggagactcattagcagctcttataagaaaaacctatatgaaggttggaagaagaaatac
aaaattgatgaccaagattctgaggaggaagagaccaatcagaggacagctgcagggcgc
aggaaaggcagaggtgggcgtggctcccagagacactccaattcacaaagttcagggcca
caagggaaggccaaatccgagctgcgcagcaaacagcaaatcctcaagatgagaaaggca
caatctaaacagaacttcttgcaaaaagggggtttgaagaagatgaaaaccaagacaaga
catctggcccatcagatgaagaaatctgcttttggaagagggaaaagcaatgggttcaag
aaaggaaagacaagaaaataa
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