KEGG   Xenopus laevis (African clawed frog): 495112
Entry
495112            CDS       T01010                                 
Symbol
plod1.L, plod1
Name
(RefSeq) procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 L homeolog precursor
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla00310  Lysine degradation
xla01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xla00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    495112 (plod1.L)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    495112 (plod1.L)
Enzymes [BR:xla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     495112 (plod1.L)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   495112 (plod1.L)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 495112
NCBI-ProteinID: NP_001088279
Xenbase: XB-GENE-955419
UniProt: Q5XGZ0
LinkDB
Position
7L:complement(67968710..68001640)
AA seq 725 aa
MGVLLLPLLLGVLAILPILPRWGNCANPDDDKLLVLTVATEETDGLRRFQRSAHSFNYKV
KVLGLGGQWLGEGQKVQLMKLALEPYADKEDLIILFTESYDVIFAAGPGELLKKFRQAKS
KVVFSAESVAYPDRHLESKYPVVPEGKRFLGSGGFIGYAAYLYKMVADWDGTDKDSDQLF
YTKLFLDPVKRGKVNITLDHRCRIFQNLYGSAEDVVLKFEHGRVRARNLVYDTLPVLIHG
NGPTKLHLNYLGNYIPHVWTFESGCNVCDEGLRNLESLSVDTLPLVVIGIFIEQPTPFVS
EFFKRLNNLNYPKNRIQLYISNHEPHHQRRVENFLQDHGTQYNFVKTVGPEENSDFADAR
NKGMDMCRQTPECEYYFSIDAPVVLKNPNVLRILIEQNKSVIAPLVSRNANLWSNFWGAL
SSDGYYARSEDYIDIVQRQRIGVWNVPYISSVYLVKGSILRSKLSQNDMFHSGTLDSDMV
FCDNVRQQGIFMFVTNRQEFGHILSLENYKTTHLHNDLWEIFENTEDWKEKYIHPNYSEA
LKGKLVEMPCPDVYWFPLFTETTCNEIVEEMENFGKWSGGGNKDERLQGGYENVPTIDIH
MNQIDYEKEWHKILLDFIAPLTQKMFPGYYTSAQFDLAFVVRYKPDEQPLLEPHHDASTF
TINIALNSVGQDYEGGGCRFLRYNCSVRAPRKGWALMHPGRLTHYHEGLRVTKGTRYIAV
SFVDP
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgggtgtgctgttattgccgcttctcctgggggtcctcgccatcctgcccatcctgccc
cgctgggggaactgcgctaaccccgatgatgataaacttttggtcctaactgttgccact
gaggaaacggatggcttaaggcgtttccaaagatctgcgcactcctttaactacaaagtg
aaggttttgggactaggaggacaatggcttggagaaggacaaaaggtccagctcatgaag
ttggctctggagccatatgcagacaaagaggatctaattatcttgttcacggaaagttat
gatgtgatttttgcagctggacccggagaactcttgaaaaaatttagacaagccaagagt
aaggttgttttctcagcagaatctgtagcttatcctgaccggcatttagagtcaaagtat
cctgtggttccagagggtaaacggttcctcggatctggaggatttataggttatgctgca
tatctgtataagatggtagcggattgggatggaacagataaagacagtgaccaactcttt
tatacaaaactcttcctagatcctgttaaaaggggaaaggttaatataaccttagatcac
agatgtcggattttccagaacctctatggatctgcagaggatgttgtcctgaagtttgag
catggtcgtgtaagagctagaaaccttgtatatgatactcttccagtcttgattcatgga
aatggtccaacaaagcttcatctgaactatcttggtaactacattccccatgtatggact
tttgagtcggggtgcaatgtctgtgatgagggcctgaggaatttggaaagtctttcggtt
gatactcttccattggtagtaattggcatcttcattgaacagccaacaccatttgtctct
gagttttttaagcgactgaacaatttaaattatccaaaaaaccgaatccagctttatatc
agcaatcatgagcctcatcaccagagacgggtggaaaattttctgcaggaccatggtaca
caatacaactttgttaaaactgtggggccagaggaaaactcggactttgctgatgcccgt
aataaaggaatggatatgtgccggcaaactccagagtgtgaatattacttcagtattgat
gccccggtagtgttgaaaaaccccaacgttcttcgaatcctcatagaacaaaacaagtct
gtaattgcccccttggtaagccgaaatgccaacttgtggtcaaacttttggggagccttg
agttctgatggatattatgctcgatctgaggattacatagacattgttcaaagacaaaga
attggagtctggaatgtcccttatatctccagtgtttatttggtgaaaggaagcattctg
agatctaaactaagtcagaatgatatgttccacagtggtaccttggactctgacatggtt
ttctgtgataatgtccgccaacagggaatctttatgtttgttacaaacagacaggaattt
ggccacatcctttccttggagaattacaaaacaactcatcttcataatgatctttgggag
atttttgaaaacacagaggactggaaagaaaaatatattcatcctaattattcagaagca
ttaaaagggaaattagttgaaatgccctgcccagatgtgtactggtttcctttatttacg
gagacaacctgcaatgagatagtagaagaaatggagaactttggcaagtggtcaggtggt
ggtaacaaggatgaaaggctccaaggtggctatgaaaatgtccctacaatagacattcac
atgaaccagatagactatgaaaaagaatggcacaagatactattagattttattgctcca
ttaactcagaaaatgtttccaggctactatacaagcgcacagtttgacttggcttttgtt
gttcgatacaaaccagatgaacaaccattacttgagcctcatcatgatgcttccaccttt
actattaacattgctctgaacagtgttggacaagattacgagggaggtggctgcagattc
ctccgatacaactgctctgtaagagccccaaggaaaggctgggctttgatgcacccaggg
cgactgactcattaccatgagggactacgtgtaacaaaaggaacaagatacattgcagtc
tcctttgtggatccttaa

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