Xenopus laevis (African clawed frog): 495130
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Entry
495130 CDS
T01010
Symbol
trim24.S, ptc6, rnf82, tf1a, tif1, tif1a, tif1alpha, trim24
Name
(RefSeq) tripartite motif containing 24 S homeolog
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xla01001
]
495130 (trim24.S)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
495130 (trim24.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
495130 (trim24.S)
Protein kinases [BR:
xla01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
495130 (trim24.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
495130 (trim24.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
zf-RING_5
zf-RING_UBOX
WH_CYT4
AAA_30
Motif
Other DBs
NCBI-GeneID:
495130
NCBI-ProteinID:
NP_001088294
Xenbase:
XB-GENE-6254312
UniProt:
Q5XGV6
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Position
3S:4563962..4619593
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AA seq
439 aa
AA seq
DB search
MEGPVDKEAPALTQPPAPLSSPSAENEAESRQGPEERSGERAALNSLETCGLCRTHIQSR
SPRLLPCLHSLCQRCLPPPERFLSVSDPRPPDPSAAPLQVGVIRCPVCSQECAERDIIEN
FFVRDTTEVPSSTVEKPSQQVCTSCEDNAEALGFCVECVEWLCKNCVQAHQRVKFTKDHT
VRQKEEVPPAVGANSQRPVFCPFHKKEQLKLYCETCDKLTCRDCQLQEHKEHRYQFIEEA
FQSQKVIMDTLIAKLTEKNKYIKFTGDQIQNRILEVNQNQKQVEQDIKVAVFTLMVEINK
KGKALLHQLEALAKDRRMKLLKQQHEVDGLSKQLEHGVYFSKWAVNSNNSTALLYSKRLI
THRLRHLLRARCDVTPVTNTVQFHCDANSWAQNIFNLGSLGIEEGDPSQQTTPMEVQNTQ
GTQPGNQLSKFPMGLANFF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcctgtggacaaagaggctccggccctcacacaaccgcctgccccgctctcc
tctcctagtgccgagaatgaggcggagagccggcagggcccggaggagaggagcggagag
agggccgcgctcaattcactggagacgtgtggtttgtgtcggactcacatccagagccgc
agcccccgacttctcccctgtctccactccctgtgtcagcgctgccttcccccgcccgag
agattcctgagtgtctccgacccgcggccccccgacccctcggccgcccccctgcaagtt
ggggttattcgctgtcccgtgtgcagtcaggagtgcgccgaaagggacatcattgagaac
ttttttgtccgggacaccaccgaggttcccagtagtaccgttgagaaaccaagtcagcaa
gtgtgcacaagctgtgaggacaacgcggaggctctgggcttttgtgtggagtgtgtggag
tggttgtgcaagaattgtgtgcaggcccatcagagagtgaagttcaccaaagaccacact
gtgcgacagaaggaagaagtcccgcctgcagttggagccaatagccagcggccggtcttc
tgccctttccacaagaaggagcaactgaagctttactgcgagacctgcgacaaactcacg
tgcagagactgtcagctccaggaacacaaagaacacaggtatcagtttatagaagaagca
tttcagagccagaaagtcatcatggacacgttgattgcaaaattaacggagaagaacaaa
tacattaaatttaccggagaccaaatccaaaaccgaatccttgaagttaatcagaaccag
aagcaggtggaacaggatattaaagtcgccgtcttcacgctaatggttgagatcaacaaa
aaaggcaaagccttactgcatcaacttgaggctttggcgaaggatcggcgcatgaagctc
ctgaaacagcagcatgaagtagacggtctgtccaagcagctggagcacggggtttatttc
tccaaatgggccgttaacagcaacaacagcactgctttactgtacagcaagcgcttgatc
actcatcgcttaaggcacttgctgcgagccaggtgtgatgtcacccccgtaaccaacact
gttcagtttcactgtgatgccaattcgtgggctcagaatatatttaacctaggttctctg
gggattgaagagggcgacccctctcagcaaacgactcctatggaagttcagaatactcag
ggaacccaaccaggcaaccagctgtccaaattccccatgggcttggctaactttttttga
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