Xenopus laevis (African clawed frog): 495149
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Entry
495149 CDS
T01010
Symbol
zc3h13.S
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
495149 (zc3h13.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
495149 (zc3h13.S)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
495149
NCBI-ProteinID:
XP_018105441
Xenbase:
XB-GENE-5798738
UniProt:
A0A8J0UK45
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All DBs
Position
2S:complement(125765226..125821155)
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AA seq
1661 aa
AA seq
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MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSAGNSAETQCRNWMKTGNCIYGNTCRFI
HGPSPRGKGYSSTYRRSPERPPGDLRERMKNKRQEVDSESQKRTTEESTSPSRKESSRGR
HREKEDIKITKERTPESDEETAEWETTRDDSDNGDVNYDYDHELSLEKKRQKIQRELMKL
EQENMEKREEIVIKKEISPEVIPKMSPSPRKSSRSPKRKSSPKPTNVSSKKEKKSVTASP
PASDQQTRHSKSAQSKKKGPRTPSPPPPTQEEALFSKKHKEKHKSKDRIDERIKDVKERG
RDVEKPKDKKEKQRDASGGSHRQKRSPSPADRSCSNSSHSRDYSPPAPRRRHPSSPVPTK
SSAHKHAISPSHRSVSPGRHHSPMSSRHHSPSSQSGSSVQRHSLSPRHRRSPSPPYQRTA
SPSARRQSTSPYTTRTSSSPQRKRSPSKHRSPTREKGRHDRERASASHDRSHERRDESRG
RKRDRDHNREPSGSRDDRESREGRDRREVRDNRDHREPRDSRDNRETRDSREYRDAKESR
DQKDSRSTRDTHEYRDRDNRESHRKDEQYDERSYRNHGRDDTSRAESRNETRNDSRNENR
SDTRNDRSGRARGRAPDPSEKTGRAARSSQADNHSSSNYHDNWESRSSYTERERYDNRDQ
GRDSSFDRRHGDRDRRDRDRDQRPTSPVRHQGRNDDTEREERREERRVDRTDERRDERAR
EREREKEREREREQREREREKERESERERARERDREREREKDREREREKEREREREERER
ERERERERERERDRERERERERERERDREKEKERERGRERDRDRPRDWEEKEKAREDRRD
KRDDVREDKRELHEDRKPKSEKGKIEGQINQNLHKDQRKRHRNESSPSPRQSPKRRREHS
PDSDAYNSGDDKNEKHRLLSQVVKPLDSRSLSPAHVTEERPSRWKEEERKSERKESSRRY
EESETKEKAIPAAEKQREHLGEPSENLKVKEPDTAIQHKAEEKDISEKVPDDKAKKTKLQ
KKAAKKKKEDEVVTEKSTTESQSDDVQVFSPKKGQKKKSVDKKRKKSKGDSDVSDEEVVQ
HSKKKKGPRTPPATVAPVSVTATIKEEVIEVLPEKKVIEVSQEKETAFSDWSDDDVPERK
EPVPLEKTIEEPIKKPSKGKVEKEELRPAASEEPPPRKLPEQKRSSSISSNQSRTSSRLR
SPSIDSVHRSGEDHNAKRRLLHDSSRDQKQNKSIEPTVERKSRIDQLKRGEPSRSTSSDR
RDSRSHSSRKSSPESDRQVHSRSGSFDSRERVPERERHEYERDRDKDRERERREGRQREW
DRDADKEWPRTRDRDRIRERERERERDRRRDLERERDKVVPESTEREQVRPLDMPSIAEP
KRTEHKERDLDKNYENSSRNSSVVDKMDRISENLQDMGSSRKNENPEIFDGGDDEEPKLD
DDQSVDSVPGEEYEPISDDELDEILADDAEKKDDHQQDDDKPSDPLDAIDVDWSSLMPKQ
PKEPRESGAALLKFTPAAVLLRVGISKRLAGPELFNKVKDLCQQSLEKPKDTETLFDHDL
GALNMAALLRKQERASLLSNLGPCCKALCSRRDLAIRKQLVQNEKGMVKQMYSNPPVVDS
ELLRLSLRLFKRKPSNFVLNQEKNDECKVSDSSKKPEPCVC
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatccgacggaaggtcacagtagagaataccaagactatatcggatagcaca
tcgcgcagaccaagtgtttttgagagacttggacctagcgcagggaatagtgctgagact
caatgtcgtaattggatgaagactgggaattgtatatatggtaacacctgtagattcatt
catggcccctcaccaagaggcaaaggttatagtagtacatacagaaggtcaccagaaagg
ccacctggagatttgcgggagagaatgaagaataagcggcaagaagtagattccgaatct
caaaaacgaacgactgaggaatccacatccccatcaaggaaagagtcttcccggggaagg
catcgtgagaaagaagatataaaaattactaaagagagaacccctgaaagtgacgaggag
acagctgaatgggaaactacaagggatgattcagacaatggtgatgttaactatgattat
gaccatgagttgtcattggaaaagaaacgccagaaaattcagagagaattgatgaaactg
gaacaggagaacatggaaaagcgtgaagaaattgtcattaaaaaagagatatctcctgaa
gtaatcccaaaaatgtcaccttcaccaagaaagtcgagcagatccccaaagcgaaaatcc
agtcccaagcctacaaatgtttctagcaagaaagaaaagaagtcagttactgcttctcct
ccagcttctgatcaacaaacaaggcattcaaagagtgcacagagcaaaaagaaaggtcct
cgtacaccaagtccacctccaccaacccaagaggaagccctgttttctaaaaagcacaaa
gagaaacataaatcaaaagatcgcattgatgaaaggatcaaagatgtaaaagaaagggga
cgtgatgttgagaaacctaaagacaaaaaggaaaagcaaagagatgcttcggggggatct
catagacaaaaaagatccccaagtccagctgatcgctcttgtagtaactcatcccattca
agggactattctccccctgcacctcggagacgacatccttcatccccagtacctacgaag
tcttcagctcataagcacgcaatatccccatctcacagatctgtttctcctgggcgccat
cactctcccatgtcttccaggcaccattctccttcctctcagtcaggttcttctgtgcaa
agacactctctttcacctcgccataggaggtcaccttctcctccctaccaaagaactgca
tcgccgtcagctaggcgccaatccacgtctccttacactacacgcacatcttcatctcca
cagagaaagaggagcccatccaagcatcgctccccaactagagagaagggaagacacgat
agggagagggcttctgcttcacatgaccgaagtcatgaaagaagagatgagagcagagga
agaaagagagacagagatcacaatcgagaaccaagtggttctagagatgatagagaatct
cgtgagggtcgtgaccgtagggaagtccgagacaaccgtgaccatagggaacctagagac
tcccgagataatcgggagactagggattctcgagaatatagagatgccaaagaaagccgt
gaccagaaggattcaagatcaactcgtgacactcatgaatacagagaccgagacaataga
gaatcccaccgaaaagatgagcagtatgatgaacgtagctacagaaatcatggcagagat
gatacttcacgtgctgaaagcagaaatgaaacaaggaatgattctaggaatgaaaataga
agtgacactaggaatgaccgtagtggacgggcaagaggacgagctccagatccatctgaa
aaaacaggtagggcagctagaagctcccaggcagataatcacagcagtagcaactaccat
gacaactgggaatcaagaagtagttatacagaaagagagcgatatgataaccgtgatcaa
ggacgggactcctcttttgatcgaagacacggagaccgggaccgaagggacagagacaga
gatcaaagaccaacttcaccagtaagacaccagggaagaaatgatgatacagaaagagaa
gaaagaagagaagagcgcagagtggacagaacagatgaaagaagagatgaaagagctaga
gagcgtgaacgtgaaaaggagagagaacgggaaagggaacaaagagaaagagagagagaa
aaagagagggaatctgagagagagcgagcccgtgagagagatcgagaaagggagcgagaa
aaggacagagagagagagcgtgaaaaggagagggagagagaaagagaggaacgggagaga
gagagggaacgagaaagggagcgtgaaagggagcgagaccgggagagagaaagagagcga
gaaagagaacgggagagagatagagagaaggagaaagagagagaaagaggcagggaaaga
gatagagatcgtccaagggactgggaggaaaaagaaaaagcaagagaagaccgaagggat
aaaagagatgatgtacgggaagacaaaagagagctacatgaagatagaaagcctaagtcg
gagaagggcaaaatagaagggcaaataaatcaaaacctacacaaagaccaacgaaagcga
cacaggaatgaaagcagtccaagcccacgccaatcccccaagcggcgccgagaacactcc
cctgacagtgatgcttacaacagtggagatgataaaaatgaaaagcacagacttctgagt
caagttgttaaacctttagattcccgatctctaagccctgctcatgttacagaagaaaga
ccgtcacgctggaaagaagaagaacgcaaatcagaaaggaaggagagctcaaggcgatat
gaagagtcagaaactaaagagaaagcaatacctgcagcagaaaagcagagggaacattta
ggagaacctagtgaaaatttgaaagtcaaagaacctgacactgcaattcaacataaagca
gaggaaaaggatatttctgaaaaggtacccgatgacaaagctaagaagacaaaattacaa
aaaaaagctgcaaagaagaaaaaagaggatgaggttgtgacagaaaaaagcacaacagag
tctcagtcagatgatgttcaagtcttttcacccaaaaaaggacagaaaaagaaaagtgtt
gataaaaaacgtaagaaatccaaaggcgactctgatgtttctgatgaggaagttgttcag
catagcaaaaagaaaaaaggacctagaacaccaccagcaacagttgctccagtttcagta
acagcaaccataaaggaagaagtcattgaagtgttgccagagaaaaaggtgatagaagtt
tctcaagaaaaagagaccgcatttagtgactggtcagatgatgatgtcccagaaagaaaa
gaaccggttcctttagagaaaactatagaagaacctatcaaaaagccttctaagggcaaa
gtagaaaaagaggagcttcgccctgctgcttctgaagaaccacctcctcgtaaactacca
gagcaaaaacgtagcagtagcatctccagcaaccagagccgcacatccagccgccttcgg
tcaccgtccattgattctgttcatcgaagtggagaagaccacaatgcaaagaggagatta
ttgcatgatagctctagagatcaaaaacaaaataaaagcatcgagcccactgtggaacgc
aagtccaggatagatcagctgaagcgtggagagcctagccgcagcacttcatcagatcgt
agggattcaagaagtcacagttccagaaaaagttcgcctgaatccgatcgtcaagtgcat
tccagatctgggtcatttgacagccgggaaagagtacccgaaagagaacgtcatgaatat
gagagagatcgtgacaaggacagagagagggaacggagagaaggaagacagagggagtgg
gatcgagatgctgataaagaatggccaagaacccgagaccgtgaccgaatcagagaaaga
gagcgtgagagagaaagagacaggaggagagaccttgaaagggaacgtgacaaagttgtc
ccagaaagtacagagagagaacaagtacgccctcttgatatgccatccattgccgagcca
aaacgtactgaacacaaggaaagggacctggacaaaaattacgaaaatagtagtcgaaat
agttcagttgtggataaaatggatcgaatctctgaaaacctgcaggatatgggcagtagt
cgtaaaaacgaaaatccagagatctttgatggtggtgatgatgaggagcccaagctagat
gatgatcagtctgtggactccgtacctggggaagaatatgagccaatcagtgatgatgaa
ctggatgagatattggccgatgatgcagaaaagaaagatgatcatcaacaagacgatgac
aaaccatcagatcctttggatgctattgatgtggactggtccagtttgatgccaaagcag
cctaaggaacctcgggagtctggagctgcactcttgaaatttacgccagcagcagttttg
cttcgtgttggcatttcaaagcgtttggctggaccagaattgtttaataaagttaaagac
ctctgccagcagtctctagaaaagccaaaagatacagagaccctgtttgatcatgatctg
ggggctctcaatatggcggcattgttgaggaagcaggagagggccagcttacttagcaat
ctaggaccctgctgtaaagccctgtgttcccgaagagacttggccattcgcaagcagctt
gttcaaaatgagaagggtatggtgaaacagatgtactcgaaccctcctgtagtggacagc
gaacttttgaggttaagcttgcgtctttttaagcggaaaccttcaaactttgttttaaac
caagaaaaaaacgatgaatgcaaagtttctgactccagcaagaagcccgaaccttgcgtt
tgttaa
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