Xenopus laevis (African clawed frog): 495254
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Entry
495254 CDS
T01010
Symbol
srsf9.S, sfrs9, srp30c, srsf9
Name
(RefSeq) serine/arginine-rich splicing factor 9 S homeolog
KO
K21123
serine/arginine-rich splicing factor 9
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
495254 (srsf9.S)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
495254 (srsf9.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
495254 (srsf9.S)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
SR proteins
495254 (srsf9.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
Nup35_RRM_2
RRM_PARP14_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
495254
NCBI-ProteinID:
NP_001088400
Xenbase:
XB-GENE-866053
UniProt:
Q5XGY8
LinkDB
All DBs
Position
1S:complement(140757864..140761441)
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AA seq
230 aa
AA seq
DB search
MSGWDREASRSGSGDGRIYVGNLPSDIREKELEDLFDRYGRIRTVELKNRGGSSAPFAFI
SYQDPRDAEDAVFGRNGYDFGSCRLRVEFPRSFRGSGGGGGGGGGYGGSRGRNGPPSRRS
EYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKDGMGIVEFIRKEDMEYALRKLDDTK
FRSHEGETSYIRVSPERNTSYSRSRSRSRGRDSPYQSRRSPRYSSPFRQY
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttgggatcgtgaggcctcgcggtctggatccggcgatggacggatatatgtc
gggaatctgccgtctgatattcgggagaaggaactagaggatctctttgatcgctatggt
aggatccggaccgtagagttgaagaaccggggcggcagtagtgccccattcgcattcatc
agctatcaggacccccgtgatgcagaggacgcagtgttcggaaggaatggctatgacttt
ggctcgtgtcgactacgtgttgagtttccgcgttccttccggggatctggcggcggaggt
ggtggtggcggcggatatggaggctcccggggaagaaatggtccgccatctcgccgctct
gaatacagagtcattgtctcaggtcttccaccctcaggaagctggcaggatctgaaggat
catatgcgggaagctggtgatgtctgttatgctgatgtacacaaagatggaatggggata
gtcgaattcattcgcaaagaagatatggaatatgctctgcggaagctagatgatacaaaa
ttccgctcccatgagggtgaaacttcttatatccgtgtgtccccagagaggaataccagc
tactctcgctccagatcccgttctagagggcgtgattccccatatcaaagccgtcgctcg
cctcgttattcttctccctttcgacagtactga
DBGET
integrated database retrieval system
