Xenopus laevis (African clawed frog): 495262
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Entry
495262 CDS
T01010
Symbol
vps11.S, vps11
Name
(RefSeq) VPS11, CORVET/HOPS core subunit S homeolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
xla04142
Lysosome biogenesis
xla04148
Efferocytosis
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
495262 (vps11.S)
04140 Autophagy - animal
495262 (vps11.S)
04148 Efferocytosis
495262 (vps11.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
495262 (vps11.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
495262 (vps11.S)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
495262 (vps11.S)
Hops complex
495262 (vps11.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
zf-C3HC4_2
zf-RING_2
TPR_Vps41
zf-C3HC4
Beta-prop_WDR36-Utp21_1st
zf-rbx1
Beta-prop_WDR3_1st
zf-RING_5
Beta-prop_IFT122_1st
zf-C3H2C3
zf-RING_UBOX
TPR_GEMI5
Beta-prop_EML_2
zf-RING_11
zf-HC5HC2H
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
495262
NCBI-ProteinID:
NP_001088406
Xenbase:
XB-GENE-922534
UniProt:
A0AA97PZ95
A0A8J0Q1C7
LinkDB
All DBs
Position
7S:70498501..70522176
Genome browser
AA seq
914 aa
AA seq
DB search
MAAYLQWRRFVFFEKEQVRVPGEGGSLLTMPTGLTVCDSGRGSLIFGDMTGNIWFLPRSL
QLTSFQAYKLCVTHLHQLKQHNILVSVGEDEEGINPLVKVWNLEKRDGGSPLCTRIFPAI
PGNKPTVVSCITVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILQEGSYPVTGMAFR
QTGKTTHLFVVTTENVRSYELTQKDYPYAELESHGCGLRCSALSDPSQDLQFVVASNECV
YLYQPDERGPCFAFEGQKMIVHWYRGYLIIVSSDRLPFAGRAGDCQAIDRQTLTIYDLSN
KLIAYSSPFTEVVDVLAEWGSLYVLTRDGLLHALHEKDTPTKLEMLFKKNLFVMAISLAK
SQHLDSDGLSEIFRQYGDHLYNKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTA
YLQALHLQSLANADHTTLLLNCYTKLKDSARLEEFIKASEGEVHFDVEIAIKVLRQAGYH
SHALYLAEKHAHHEWYLKIQLEDIKNFQAALQYIGRLPFPQAESNMKRYGKTLMCHVPND
TTQLLNNLCTSFPQNGEGSRANPEEFIPIFANNPSELKTFLEHMIKEHSDSPQGVYDTLL
ELRLQNWAHELDPQLKNQLHDDAISLLKSGRFKNVFDKALVLCQMHNFQNGVLYLYEQGK
LFQQIMHYHMQNDQYQKVIEACERYGDQETCLWEQALSYFARKEEDCKEYIAMVLGHIEN
RNLMPPLLVVQTLAHNSTATLSVIREYLINKMQKLSQKIEEDERTVHHYREDTARIRREI
QEIRTSPKIFQKTKCSICSSSLELPSVHFLCGHSFHQHCFESYSENDVDCPTCLPENRKV
LDMIQAQEEKRELYDQFQHQLKHSSDGFSVVADYFGRGVFNKLTLITDAPTGRSGMSKEA
GLQRELLINTKRKA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacttacagtggcggcgtttcgttttctttgagaaagagcaggtgcgggtt
cctggtgaaggtggaagtctgctcaccatgcccactggtttgactgtgtgcgactctgga
cgtggcagccttatcttcggagatatgacaggaaatatatggttccttccccgctctctg
cagcttacctcttttcaggcatacaaattgtgtgtaactcatcttcaccaactgaagcag
cacaacatactggtttctgttggagaggatgaggaaggaatcaatccactggtaaaggtt
tggaacctggaaaagcgagatggtggaagcccactttgcacaagaatctttccagccatt
cctggtaataaaccaaccgtggtgtcatgcatcacagtccacgagaacctcaacttcatg
gcaattggctttgctgatggaagtgttgtccttaccaagggtgatataacacgcgatcga
cacagtaagactcagatcttgcaagagggtagttacccagttacaggaatggcgttcaga
cagactggtaaaaccacacacctctttgtggttaccacagaaaatgtgcggtcatatgag
ctgacacaaaaggattacccatatgcagaactggagtcccatggctgtggcctgaggtgc
tccgccctgtctgatccttctcaggacttgcaatttgtggtggccagtaatgaatgtgtg
tatttatatcagccagatgagaggggaccttgcttcgccttcgaagggcaaaagatgatt
gtgcactggtatcgaggatatctcattattgtatcaagtgacagattaccatttgctgga
cgtgcgggggattgccaggcaattgataggcaaacactgactatatatgacctgagcaac
aagctgattgcctacagcagtcctttcacagaggttgtggatgttctggcagagtggggt
tccctgtatgttttgacacgtgacggactcctgcacgctttacacgaaaaggacacgcca
accaaattggagatgctgtttaagaagaatctctttgttatggccatttctctagcaaag
agccagcatttagatagtgatggcctgtctgagatctttcgtcagtatggagatcacctt
tacaacaagggagaccatgatggagctatccagcagtatattaggacgattggtaagcta
gagccctcttatgtgattcgcaaatttctggatgctcagaggatacacaatttgactgca
tatcttcaggctttgcatctgcaatctcttgccaatgctgaccacacaacattgctgttg
aactgttacaccaaactaaaggacagtgcccgcctagaggagtttattaaggccagtgaa
ggagaggtacatttcgatgtagaaatagccataaaggttcttcgacaagccgggtatcac
tctcatgccctctaccttgcagagaagcacgcccatcatgagtggtacctgaagattcaa
cttgaggacattaagaattttcaggcggcacttcagtacattggacgtcttcccttccct
caagctgagagtaacatgaaacgctatgggaagacccttatgtgtcacgtacccaacgac
accacccagttactgaataatctgtgtactagtttccctcagaatggtgagggtagcagg
gccaatcctgaggaatttattccaatttttgctaacaacccttcggagctgaagaccttt
cttgagcacatgattaaggagcacagtgactcccctcagggagtctatgacacactgtta
gagctgcgcttgcagaactgggctcacgagttggacccacagttaaagaatcaacttcat
gatgatgctatatccctactgaagagtggccgcttcaagaatgtgtttgataaggctcta
gtcttgtgccagatgcacaattttcagaacggagttctgtatctatatgagcagggtaaa
ctcttccagcagatcatgcattatcacatgcagaacgatcagtatcagaaagtaatagaa
gcctgtgagcgatatggagatcaggagacctgtctttgggagcaggcacttagctacttt
gccagaaaggaagaagactgcaaggaatacattgccatggttttggggcacattgagaac
cggaacctcatgccaccactgttggtggtccaaaccctggcacataactccactgccacc
ctgtctgttattcgtgagtatctgatcaacaaaatgcagaaactgagccagaagattgag
gaggatgagagaacggtgcatcactaccgcgaggataccgcacgcattcgccgagaaata
caagaaatccgcaccagccccaagattttccagaagacaaagtgcagtatatgtagcagc
agtcttgagctgccatctgtgcatttcttgtgtggtcactccttccaccaacactgcttt
gaaagctattcagaaaatgatgtggactgtcccacctgcctgcctgaaaatcggaaagtc
ttagatatgatccaggcacaggaagaaaagagagaactttatgaccagttccaacaccag
ttaaagcattccagcgatggatttagtgttgtggcagattattttggtcgtggtgtgttc
aacaagctgacactcataaccgatgcacccactgggagatcgggaatgtcaaaggaagcc
ggactgcagagggaacttctgatcaataccaagaggaaagcgtaa
DBGET
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