Xenopus laevis (African clawed frog): 495281
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Entry
495281 CDS
T01010
Symbol
herc4.L
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X2
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
495281 (herc4.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
495281 (herc4.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
495281 (herc4.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
HECT type E3
495281 (herc4.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
495281
NCBI-ProteinID:
XP_018080834
Xenbase:
XB-GENE-17343428
UniProt:
A0A974CEI9
A0A1L8FJM6
LinkDB
All DBs
Position
7L:35225868..35263035
Genome browser
AA seq
1047 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC
NDLGQLGHDKSRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSV
AEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESA
PRHIKSLAGIPFAHIAAGGGHSFVLTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLR
SQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIA
CGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANG
CYCVKRIYSGGDQSFAHYFTIQHCLPPDDFTKCNCSKKIWTLDEKLIQRWLNCSPGRLPP
EIVNEIDKVFSSAACLNGSFLATSNNDHYRTSSKFSGVDMNVARLLLHKLMDSPQIVQQV
AASLERNLIPRLTSSPPDIECLRLYLTLPECPPMTETNNFPSLAIPFATAIVNLEKVPLK
VLENWWALLEPPLYMRIVQLYKDVVVHLLKLSKNGIPLAEQRLFYIFINTALRVLEILHR
VNEKAAQIIPYDKFYIHEVQDFVDIQNDYINWIQQQASGMMADPLVTICTYPFVFDAQAK
TTLLQTDAAIQMRVAVDNAHRQNISSWFLPVVESVDPCLMLIVRRDNIVGDAMEVLRKTK
NIDYKKPMRVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSDQTFE
DSDLFHLIGVVCGLAIYNFTIIELHFPLALYKKLLKKKPTLEDFKELMPVVGRSMQQLLD
YTEDDIEETFCLYFTITVDNFGTTEVKELIPNGAETPVNKKNRQDYVDAYVDYIFNKSVA
SLFSAFSAGFHKVCGGKVLELFQPNELQAMVIGNTIYDWKELEKSTEYKGEYWAEHPTIK
MFWEVFHKLALEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGEQFLPVAHTCFNLLD
LPKYSNKETLQSKLIQAIDHYEGFSLV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctggggaaatgcatcttttgggcagctaggattaggggggattgatgaagag
gttgttctagaacccagaagatgtgactttttcatcaataaaaatgtccgtgatgtcgga
tgtggaagcagacacaccgtttttgtcctggatgatgggacagtttacacctgcggatgt
aatgatcttggacaactgggacatgacaaaagcagaaaaaagccagaccaggttggagcc
ctggatgctcagaccattgtggcagtttcatgcggagaagctcacaccttggcattaaat
gacaaaggtcaagtgttttcttggggtcatgctgcacatggacagataggtctctctgtt
gcagaagattatattagagtaccaagaaatataaagagtttgtatgatatacaaattgta
caagttgcctgtggtcatcatcattcactcgcactatctaaagaaagtgatatttactca
tggggacagaaccagtatggtcagcttggcttgggctcggaaataaagaaagagagtgca
cccagacatatcaaatctctggcagggattccctttgctcacattgctgctggaggtgga
cacagttttgtgttaacaatgtcaggggccatttttggttggggaagaaacaaatttggt
cagcttggtcttaatgatgaaactgatcgaagtgccccagctcttctgaagtcgcttcgc
tcacagaaaataattcatatctgctgtggagaagatcatacagctgctttaaccaaagag
ggtggtgtatttacatttggagctgggggctatggacagcttggccacaactctaccaac
catgaagtcaacccaaggaaagtgtttgagcttatgggaagcattgtgacgcaaattgca
tgtgggaggcagcacacattagcttttgttccttcatctggacgcatatattcatttggg
cttggtggcaatgggcaattaggaacagggtctacaagtaacagaaaaagtcctttcaca
gtgaaagggaactggctgactcatgaagactatgttcagcgccttcccgaggctaacgga
tgttactgtgtgaagagaatttacagcggtggagatcagagttttgcacattattttact
atacagcattgccttcctccagatgactttacaaagtgtaattgttctaaaaaaatatgg
actttagatgagaaacttatacaacgatggctgaattgttccccaggaagacttccacca
gaaatagtgaatgaaatagacaaagtgttttcatcagctgcatgcttaaatggaagcttt
ctagcaacaagcaacaacgatcactacaggacaagttccaagttttcaggggtagacatg
aatgttgctagacttctacttcacaagttgatggactcaccacaaatagtccaacaggtg
gctgccagcttggagaggaatctcattcccagacttacaagttctccaccagacattgag
tgcttgcgtttgtatctcaccctcccagagtgtccccccatgactgaaaccaacaacttc
ccttccttagccattccttttgctacagctattgtaaacttagaaaaagtaccattaaaa
gttttagaaaattggtgggccctgcttgagcccccgctatacatgagaatagtacaactt
tataaggatgtcgtggtgcacttattgaaactctccaaaaatggaattcctcttgcagaa
caaagactattctacatatttattaatactgctctcagggttttggagatcctgcacagg
gttaatgaaaaagctgcacagatcataccttatgataaattctacattcatgaagtgcaa
gattttgtagatatccaaaatgactacatcaactggatccagcaacaagcatctggaatg
atggctgatccgctggttacaatttgcacatacccctttgtttttgatgctcaggcaaag
acaacacttctgcagacagatgcagccattcagatgcgggtggcagttgacaatgctcac
aggcagaacatttcgtcctggtttcttcctgtagttgaatcagtagatccatgtctgatg
ttaatcgttcgcagagacaatatcgttggtgatgccatggaagttctaaggaagacaaaa
aacatagactacaaaaagccaatgagggtaatctttgttggagaagaagctgttgatgca
gggggcgttcgcaaggagtttttcttactcatcatgagggaattactggaccccaagtat
ggaatgtttagatattatgaagaatccagattaatctggttttctgatcagacctttgaa
gacagcgatttattccaccttattggtgtagtctgtggtttagcaatatacaatttcaca
attattgagctccacttccctttggctttatataagaagcttctgaaaaagaaaccaacc
ttggaagactttaaggagctgatgcctgttgtcggacggagcatgcagcaattgttggac
tatactgaagatgacattgaggagacattctgcctctattttacgatcactgtagataac
ttcggaaccacagaagtcaaagagctaataccaaatggagcagagacaccagtgaataag
aaaaacaggcaggactatgtagatgcctatgtagactacatctttaacaagtcagtggcc
tccttattcagcgcgtttagcgcagggtttcacaaagtgtgcggcgggaaggtccttgag
ctcttccaacccaatgaactgcaggccatggtgattgggaatacgatctatgactggaag
gagctcgaaaaaagcactgaatacaaaggagagtattgggccgaacaccctacaatcaag
atgttctgggaagtttttcataaattggccttggaaaagaaaaagcaattcttgcttttc
cttactggcagtgaccggatccctattctcggtatgaaaagtttaaagcttgtgatccag
ccaacaggaggaggagaacagttcctaccagtagctcatacgtgcttcaacctcttggat
cttcccaaatacagcaataaagaaacactgcaatccaaactgattcaagctatagatcac
tatgaaggctttagccttgtctaa
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