Xenopus laevis (African clawed frog): 495282
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Entry
495282 CDS
T01010
Symbol
rrp12.S
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
495282 (rrp12.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
Other 90S particles
495282 (rrp12.S)
Pre-60S particles
Other pre-60S particles
495282 (rrp12.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
495282
NCBI-ProteinID:
XP_018082954
Xenbase:
XB-GENE-993606
UniProt:
A0A8J0T5X0
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Position
7S:complement(22065827..22118062)
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AA seq
1290 aa
AA seq
DB search
MGKAGKLRSGIAGKAKRWKKGHSSESNPELRRHREAARSRFFSRPSGKSDLTVDALKLHN
DLQSDSLSVQKKSEKSEALMEDEDEMAITLKSGVSFLSGLSDCTNLTFGKVQRYWESNSA
AHKEICAVLAAVTEVIRSQGGTESETEYFAALMTTLEAVESPESLAAVTYLLNLVLKRVP
GPVLIKKFSDTSKALMDIMASQASSGSTSAMRWIVSCLAILLRKQDLLTWSYPSTLQVYH
GMLSFTVHTKPKIRKAAQLGVCSILKGSEFMFSESAPKHHPAVHTTAKFCIQEIEKSGGS
KEATTTLHMLTLLKELLPCFPVSMVKSCCETLLKVMTLSNVLITACAMQAFHGLFHACPG
ISALTAELNAQIITALYDYLPSENDLQPVLAWLAVMEKAHINLARLQSELCLGHLSRLFL
TAMNCLLSPHLQVVSAAARTLKTLLTECIAPNIADIGTVPSAPTSGPAGHICKMFRCVEE
GLSYKFHSSWSYVLQVLQTFFEAAGKNCHPFMKKCLQTLADLRSSAHFSCTGELDRAVGA
AVESMGPEVVLKAVPLQINGTEDSCDFPRSWLVPVIRDYVKNTELGFFIKYFLPLAAKLK
TRASELSQEGRNLESKIYDTLQWQIWTMLPGFCTKPTDVVDSFKGIARSLGMAIGDRPDL
RLTVCQALRTLINKGCEADSDKAEVSRFAKNFLPILFNVYSQPLAPGEGPSQKLPVLDTV
KAYLTITDQQMVSGFLDKASVKLTEAETSEPTRLYMLDLIIAMAPYADEPSMTKIYNTIL
PYLEDKNHSLQKKAYRVLEEICGGEQPPCKEFVNNNLENLKNTLLTSLKSVSSPAKRPRL
KCLIHIVKQLAADHEEFIISLIPEVMICTREVSVGARNNAYTLLAEIGYAFLRFNHDQKE
AMEQYLAVVYAGLAGSVTMISCSVLTLTRLLFEFKDQMGVEVIEQLLKNVCLLLGSRTRE
VVKAALGFIKVIIFIMDIKVLTKQLQMMMEAIGNINSDMRRFFRVKLKNIFTKFIRKFGF
ELVKSMLPEDYHKVLVNIRKAEAKNKKQKALKEAAAEGEEDDQDTKKLKGDSIEDILADS
DEEVEEEKPSKQQKKQARQKSQAWLKEGEDDEPLNFLDPKAAQRVLATRPDAKNTKQKHD
FKTSSDGRLIIQDDEAEKDKTKAAVDEEMADLMQDVGIRSKKAQKKRFREHDDDDYDDAA
DKKPQYKSGGSGIHRPISKKTESGANYKTKKGKGDVKQQGKHDPYAYIPLNKANLNRRKK
AKMQGQFKGMVRAAQRGAQSGLKKRKDRKR
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggcagggaaattgcgctccggtattgccgggaaagccaagcgctggaagaaa
gggcacagcagcgagtctaaccctgagttgcggcggcaccgagaagccgctaggagccga
ttcttcagccggccttcaggcaaaagtgacctcacggtagatgctcttaagctccacaat
gacctccagtcagactccctgtctgtgcaaaagaaatcggagaaatccgaagcgcttatg
gaagatgaggatgaaatggcaataactttgaaatctggagtttcttttctgagcggcctg
tctgactgcactaatcttacatttggaaaagtgcagaggtactgggagtcaaactcggct
gcacataaggagatctgtgctgtgctggctgctgttactgaagttattcgctctcaagga
ggaaccgagtcagagactgagtactttgctgctttgatgactactctagaagctgtggag
tcccctgagtcattggctgcagttacatatctgcttaacctggttctcaagagggttcct
ggacctgttcttatcaagaagttttctgacacatccaaggcccttatggatatcatggct
tctcaagcaagcagcggcagcacctcagccatgagatggattgtctcttgtctggccatt
ctgcttcgcaagcaggatcttctcacatggagctacccctcaaccctccaagtctaccat
ggaatgctcagcttcactgtccatacaaaacctaaaatccgcaaggcggcccagctagga
gtgtgttccatccttaagggcagtgagttcatgttcagtgaatcagcacctaaacaccac
ccggctgtacacaccacagctaaattctgtatccaggaaatagagaagtctggaggtagt
aaagaagccactacaaccttgcatatgctgactttactaaaggaactcctgccctgtttc
cctgtcagtatggtgaaatcttgctgtgagaccctgcttaaggtcatgacgctaagcaat
gtgctgatcactgcctgtgcaatgcaggccttccatggtctcttccatgcatgtcccggc
atctcagcattgactgcagaactcaatgcccaaatcattacagccctatatgactacttg
cccagtgagaatgatctacagcctgttttggcatggttagctgtcatggagaaggcccac
atcaatttggccaggttgcagagtgaactgtgcctgggccatctctctcgtctcttctta
acagccatgaactgcttattatctcctcacttgcaggttgttagtgcagctgcccggacc
ttgaagactctacttactgagtgcattgctccaaatattgctgacatcggcactgtgcct
tcagctccaacttctgggccagcagggcacatctgtaaaatgttcaggtgcgtggaggag
ggattatcatataaatttcactcatcttggtcctatgtccttcaagtcttgcaaaccttt
tttgaagccgctgggaagaattgccatccattcatgaagaagtgtttgcagactcttgcc
gacctgagatcctctgcacatttttcctgcactggagagctggatcgcgctgtgggtgct
gctgtggaaagtatgggtcctgaggttgtcctgaaagctgttcctctgcagattaatggc
acagaggactcctgtgacttccctcgaagttggttagtccctgtgatacgagactatgtg
aagaacacagagcttggtttctttatcaagtacttcctgcctcttgctgccaaattaaag
actcgggcttctgaattatctcaagaagggcgaaatcttgaatcaaaaatctatgacacc
cttcagtggcaaatctggacaatgttacctggattttgcaccaaacccacagatgttgta
gattccttcaaaggaattgcacgcagcctgggaatggcaatcggcgatcgtccagacctc
agacttacggtctgccaagcactgcggacacttatcaacaagggttgcgaagcagattct
gacaaggctgaagttagccgctttgccaagaacttcctcccaattctgtttaatgtgtac
agtcagccgctagctccaggagaggggccctctcagaaactgccagtgttggacacagtc
aaagcatatctcactatcacagaccagcagatggttagcgggtttttggataaagcaagt
gtcaaacttacagaagctgagacttcagagcccacaagattatatatgctggacctgatc
attgccatggcaccgtatgcagatgaaccttccatgactaagatctacaacactatattg
ccatacctggaggataaaaatcacagtttacagaagaaagcctatagggttttggaagaa
atatgtggaggggaacagccaccatgcaaagaatttgtaaataacaatcttgaaaaccta
aagaatacactcttgacctccctaaaaagtgtttcatccccagctaaaaggcctcgactg
aaatgtctgatccatattgtgaaacaactggctgcggatcatgaagaatttattatatcc
cttattcctgaggtgatgatttgtaccagagaagtgtccgtaggagcacgcaacaatgca
tacacattactggcagagataggatatgccttcctgcgcttcaaccatgatcagaaagag
gctatggagcagtaccttgctgttgtctatgcaggactggctggttccgtcaccatgatc
agctgctccgtgctgacgctcacaaggctcttgtttgaatttaaagatcagatgggcgtg
gaggtgattgaacagttgctgaagaacgtctgcctcctcttaggatctagaacacgggaa
gttgttaaagctgcattgggtttcatcaaagtcataatcttcattatggacataaaagtt
ctgaccaagcagctgcaaatgatgatggaagctataggaaacatcaacagtgacatgagg
cgcttcttccgagtgaagctgaaaaacatcttcaccaagtttattcgaaagttcgggttt
gagcttgtgaagtctatgctgcctgaggattaccataaagtcctagtaaacatccgtaag
gctgaagcaaaaaacaagaagcagaaagcattaaaagaagctgcagcagagggagaggag
gatgatcaagacaccaaaaagttgaagggagatagtatagaagatattttggctgattct
gatgaagaagtagaggaagagaaaccaagcaaacaacagaagaaacaagcccggcaaaag
agccaggcttggctaaaagaaggggaggatgatgaacctctaaatttccttgatcccaaa
gctgcacagcgtgtactggctacaaggccagatgcaaagaacaccaaacaaaagcacgac
tttaagacctcgtcggatgggcgtctcataattcaagatgatgaagcagaaaaagataag
actaaagcagctgttgatgaagaaatggcagatctcatgcaggatgtgggaattcgaagt
aaaaaagctcagaagaagagatttcgagaacatgacgacgacgactatgatgacgccgca
gacaaaaaaccacagtataaatctggaggctctggaatacacagaccaatctccaaaaag
acagaaagtggagcaaactacaaaactaagaaaggaaaaggtgatgtgaaacaacaaggc
aagcacgatccatatgcatacatccctctaaacaaagccaaccttaaccggaggaaaaaa
gcaaagatgcaaggccagtttaaaggcatggtgagagcagcacaaagaggagcacagagt
ggactgaaaaagagaaaagacagaaagcgttaa
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