KEGG   Xenopus laevis (African clawed frog): 495400
Entry
495400            CDS       T01010                                 
Symbol
vapb.S, vamp-b, vamp-c, vap-b, vap-c, vapb, vapb.L
Name
(RefSeq) VAMP (vesicle-associated membrane protein)-associated protein B and C S homeolog
  KO
K10707  vesicle-associated membrane protein-associated protein B
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    495400 (vapb.S)
Membrane trafficking [BR:xla04131]
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    495400 (vapb.S)
  Other autophagy associated proteins
   ER-mitochondria tethering complex
    495400 (vapb.S)
SSDB
Motif
Pfam: Motile_Sperm Ig_CFAP65_4th Cep192_D6 Cep192_D3 EMC3_TMCO1 HALZ ASH HEAT_Maestro_2 NDUF_B4 YabA ATP-synt_G DUF1178
Other DBs
NCBI-GeneID: 495400
NCBI-ProteinID: NP_001088528
Xenbase: XB-GENE-6253857
UniProt: Q5U511
LinkDB
Position
9_10S:complement(15990450..16007874)
AA seq 243 aa
MAKVEQILQLEPQQELKFQGPFTDVVTTNLKLGNPTDKNVCFKVKTTAPRRYCVRPNSGV
IDAGSSIIVSVMLQPFDYDPNEKSKHKFMVQSIIAPSDTSDMEAVWKEAKPDDLMDSKLR
CVFELPSENEKAHDGEINKVISSSSITKTESSLSKSISSNLDDSEYKKVAEENKRLQAEM
QRLREEYKQFKEEDGLRMRKMQPTSSPHRPVSGLAKEEGVNTRILALVILFFIIGVIIGK
VAL
NT seq 732 nt   +upstreamnt  +downstreamnt
atggccaaggtggagcagatccttcagctggagccccagcaagagctcaagtttcaagga
ccctttacagacgtcgtcactacaaacctgaaactcgggaaccccacagataaaaatgtc
tgtttcaaagttaagaccacagcgcctcgccggtactgtgtgcgtccaaacagcggagtg
attgatgccggatcctccatcattgtgtccgtgatgctacagccattcgactatgaccct
aatgagaagagcaagcataagttcatggtgcagtccatcatagcaccatcagacacctca
gatatggaagctgtatggaaagaagcgaagccggatgatctcatggattccaagctccgg
tgtgtgtttgagctgccgtcagagaatgagaaagctcacgatggcgaaataaacaaagtt
atttctagcagcagtataacaaagacagagtcctcgctgtctaaatcaataagttccaat
ctggatgattccgagtataagaaagtggcggaagaaaacaagaggctgcaggcggaaatg
cagaggctacgggaggagtacaagcagtttaaggaggaagacggtttgagaatgcgaaag
atgcagcccacaagtagcccccaccgaccagtttctggccttgcaaaagaagaaggcgtt
aacactcggatacttgcactggtcatcctcttcttcatcatcggtgtcataatagggaaa
gtggccttgtag

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