KEGG   Xenopus laevis (African clawed frog): 495436
Entry
495436            CDS       T01010                                 
Symbol
bicc1.L, Bicaudal-C, bicc, bicc1, bicc1-a, bicc1-b, x-Bic-C, xBic-C
Name
(RefSeq) protein bicaudal C homolog 1-B
  KO
K18756  protein bicaudal C
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    495436 (bicc1.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     495436 (bicc1.L)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_2 SpoIIIAH SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 495436
NCBI-ProteinID: NP_001088559
Xenbase: XB-GENE-865790
UniProt: Q5U4T7
LinkDB
Position
7L:10391416..10562406
AA seq 970 aa
MAAQCGGYMNQSDPGSNSERSADSPLPGSEDDSPGSAAPHDPEWREERFRVDRKKLETML
QAAAEGKGKSGEDFFQKIMEETNTQIAWPSKLKIGAKSKKDPHIKVSGKKENVKEAKERI
MSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQ
VSIAGQPAGVESARVRIRELLPLVLMFELPIAGILQPIPDPNSPTIQQISQTYNITVSFK
QRSRVYGATVIVRGSQNNTSAVKEGTAMLLEHLAGSLASAIPVSTQLDIAAQHHLFMMGR
NGCNIKHIMQRTGAQIHFPDPNNPLKKSTVYLQGTIESVCLARQYLMGCLPLVLMFDMKE
EIEVEPQCITQLMEQLDVFISIKPKPKQPSKSVIVKSVERNALNMYEARKCLLGLDSSGV
TITNQSTISCPIPMNCHGLDILAAGLGLSGLGLLGPNTLSVNSTTAQNSLLNALNSSVSP
LHSPSSAAPSPTLWATSLANTSNATGFPAIPHLMIPSAAQATLTNFLLSGVPNYGQNTPS
PPPGLTPVDVHMNGLHSECKKVTSVLNGHVKPTNMKYGTISSSSLGDKVLNTNLAEASRQ
SNNHSSAEEVNSKTDSEGCNDAFVEVGMPRSPSHSANTKDLKQMLNSTKAPCPTRQTVKL
LHGTKNSHLHTAERLLSDSEMSPTEGPMTDKKAPGSERAAERAAAQHNCEMARFTSQSAY
GNMQAYDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANHVPY
KPTMSTTYENSPMSLSRSNSREQLGNGSDSDNWRERNGIDSSHNDYSSSIGSPKRKQNKS
AEHYLSSSNYMDCISSLTGSNGCNLNSSFKGSDLPELFSKLGLGKYTDIFQQQEIDLQTF
LTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPTNIRSSFLEGGASGRLPRQYH
TDIASVSGRW
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggcagctcagtgcggcggatacatgaaccagtccgacccgggatccaacagcgagcgc
agcgctgactccccactcccgggctcagaggatgattctcccggctccgccgccccccac
gatcctgagtggagagaagaaaggttccgcgtggatcggaagaagctcgagacaatgtta
caggctgctgctgaaggaaaaggaaaaagtggggaagatttctttcagaagattatggaa
gagacaaacacacagatcgcttggccgtccaagctgaagattggggcaaagtctaagaaa
gatccacacattaaagtctctggcaagaaagaaaatgtgaaagaagcgaaggaaaggatc
atgtcagtgctggacacgaagagtaaccgggtgacattgaagatggatgtgtcacacacg
gagcattcgcacgtcattgggaaaggtggcaacaacatcaagaaggtgatggaagagaca
ggctgccacatccatttcccagactccaacaggaataaccaagcagagaaaagcaaccag
gtgtcgattgcagggcaaccagctggtgtggagtctgcaagagtccgaataagggagctg
ctgcctttagtactgatgttcgagctgcctatagccgggattctgcaaccaataccagac
cccaactctcccaccattcagcaaatatcccagacgtacaatataacggtttctttcaag
caacgctcacgtgtgtacggtgctactgttatagtgagaggttcccagaataacaccagt
gctgtgaaggagggcacagcaatgctgcttgaacatcttgctggcagcctggcttctgcc
atcccagtcagcactcaactggatattgctgctcaacatcacctcttcatgatgggacgc
aatggttgcaacattaagcacatcatgcaaagaacaggtgctcagattcacttcccagat
cctaataaccccctaaagaaatctactgtctacctccaaggcaccattgagtctgtttgt
cttgctaggcagtatctcatgggatgccttcctcttgtgttgatgtttgacatgaaggaa
gagattgaagtagagccacagtgcatcactcagctcatggaacaattggatgttttcatc
agcattaaacccaaacctaagcagccaagtaaatctgtgatcgtaaaaagcgtcgagcga
aatgccttaaacatgtacgaagcaagaaaatgccttctcggactcgatagcagcggagta
accattacaaaccagtctacgatatcctgtccgattccaatgaattgccatgggttggat
attttggcagcaggcctaggtctctctggattaggtctcttgggtcccaacaccctttca
gttaattccactaccgctcagaattctctgctgaatgccctgaacagctctgtgagccct
ctgcatagtccaagctctgctgctcctagcccaacgttatgggcaacttcgttagccaat
acatcaaacgcaacaggcttcccagcaataccccatttaatgatcccatctgctgcacaa
gcaacgttaaccaacttcttgctttctggggttccaaactatggtcagaacactccatct
ccacctcccgggctgacgcctgtcgatgtccacatgaatggcttacactctgaatgcaag
aaggttacatcagtgttgaatggtcatgtaaagccaacaaatatgaaatatggaacaata
tcttcttcatctctaggagacaaggtgttaaacacaaaccttgctgaggcatcaaggcag
tcaaataaccacagctcggctgaagaagtgaattccaaaacagattcagaaggttgcaat
gatgcctttgtggaagtgggcatgcccagaagtccgtctcactcggccaacaccaaggat
ctcaagcagatgcttaactccaccaaagctccatgtccaacaaggcaaactgtcaaactg
ttacatggcacgaaaaactctcacttacatactgcagaaagattgctttcagattcagaa
atgagtcctacagaaggtcccatgactgataaaaaggcccctggaagtgaacgggctgca
gaaagagctgctgcccaacataattgcgagatggcgcggtttacttcacagtcggcgtat
ggcaatatgcaggcctatgactatgaacagaagaagctgttggcaacaaaggccatgtta
aaaaagcccgtggtgacagaagtgaggacgccaacaaacacgtggagtgggctcggcttc
tccaaatccatgccagccgaaaccattaaggaactgagacgggccaaccatgtaccatac
aagccgaccatgagtacgacatacgagaactcccccatgtctctttcacggtccaacagc
cgggagcagctgggaaacggcagtgactccgataactggagggagagaaatgggattgac
tcgtctcataacgactactcgtcctccatagggagtcccaagcgaaagcaaaacaaatct
gcagaacactatctaagcagcagtaattacatggactgcatttcctcactaactggaagc
aatggatgtaacctaaacagttcattcaaaggttctgatcttcctgaactcttcagcaaa
ctgggcctggggaagtacaccgatatattccagcagcaagagattgaccttcagacgttc
ctcacattaaccgatcaggatttaaaggaacttggcattacgacttttggtgctcgaagg
aaaatgttgctggccatctcagaactgaataaaaatcgaaggaagttatttgaacccacc
aatatacgctcctcatttctagagggcggggccagcggaagactcccgaggcaatatcac
acagacattgcgagcgtcagtgggcgctggtag

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