KEGG   Xenopus laevis (African clawed frog): 495686
Entry
495686            CDS       T01010                                 
Symbol
usp47.L, usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
  KO
K11857  ubiquitin carboxyl-terminal hydrolase 47 [EC:3.4.19.12]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xla01002]
    495686 (usp47.L)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    495686 (usp47.L)
Enzymes [BR:xla01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     495686 (usp47.L)
Peptidases and inhibitors [BR:xla01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   495686 (usp47.L)
Ubiquitin system [BR:xla04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    495686 (usp47.L)
SSDB
Motif
Pfam: USP47_C UCH UCH_1 ubiquitin Ubiquitin_2 Dockerin_1
Other DBs
NCBI-GeneID: 495686
NCBI-ProteinID: NP_001088634
Xenbase: XB-GENE-5760104
UniProt: Q5U252
LinkDB
Position
4L:4145765..4191121
AA seq 1350 aa
MRPGEESQLVPKEIENAADEPRVLCIVQDTTNCKSVNERITLNLPASTSVKQLYEDVSNK
AGYVSSTFSLMWGNGASNTDMAALDPTPDRTLQEAGFEAGKKNFLHLTDKDGEQPQLTSD
ESGTADSSGLDDSSQEKFIGPLPREESVAGTSNYVSQNYSYSSLLSKSDTGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVKCLECG
YESWRIDTFLDIPLVIRPYGSNTAFGSMEEALHAFIQPETLDGPNQYFCERCKRKCDARK
GLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPDELDMSPFIDMEDEKSPQTDSCT
DSGAENEGSCHSDQMSNDFSTDDAVDEGICLETNSNIEKLNKSVAEKNSLYELFSVMVHS
GSAAGGHYYACIKSFADGQWYSFNDQHVSRITQEDIKKTYGGATGNRGYYSSAFASSTNA
YMLMYRLKNPARNAQFLEASEFPEHIKLLVQKEQEQEEQEKRQREIERNTCKLKLFCMHP
VKQIMMESKLEVHKDKTMKEAVEIANKLMDLEGVIPLDCCRLVKYDEFHDYLERSYEDEE
DRTMGYLLGGVKSSYMFDLLLETKRPDQVFQSYKPGEVMVKVYVVDLKTETVASPVSVRA
YLSQTIIEFKQLISKSVDLPPDSMRVILERCYNDLRLLNVANKTLKAEGFFRSNKVFVES
SDSLDHQLVFTDSHLWKLLDRHANTIKLYVSLPEHPRPTARSVGPKGGGDMNPQEDYCSR
AKSVDAILEESTEKLKSLSLQQHQDGGNGDSSKSTEGSDFENIDSPLNEVDSSGSADNRE
LENRILPADPENNFQPEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADGTPIPLANG
LDSHSITSSRRSKANDGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYFKAEPHAGEGC
LAEGSKCLLVNVDKRITLAAFKQQLESFVGVPSSQFKVFRVYASNQEFESVRLNETLSSF
SDDNKITIRLGRALKKGEYRVKIFQLLVNEPEPCKFVLDAVFSKGMTVRQSKEELLPLLR
EQCGLDLSIDRFRLRKKTWKNPGTVFLDSHVYENESISSCWEVLLEALDETEKMKSMSQL
SLFTKRWRPSELKLDPFKEVVLESNSVEELRDKICEISAIPLENLEFAKGRGTFPCDISV
LEIHQDLDWNPKVSTLNAWPLYISDDGAVIFYRDKTEEVMELTDEQRNELVKKESSRLQK
TGHRVTYSPRKEKALKIYLDGPTNKDSAQD
NT seq 4053 nt   +upstreamnt  +downstreamnt
atgaggcctggagaagagagtcagctggtgcccaaagagattgaaaatgcagccgacgag
ccaagagtactgtgcatcgtgcaagacaccaccaactgcaagagcgtaaacgaacgaatc
acgttaaacctcccggcgtccacctcggtgaaacaactgtacgaagacgtgtccaataag
gcgggatatgtttccagcacgttcagtctgatgtgggggaatggagccagtaacactgac
atggcggcgctggatccaaccccagacaggactttgcaagaggccggatttgaagcagga
aagaaaaacttccttcatttgacagataaagacggggaacagccacagctcacgtcggat
gaatcagggacagcagacagcagtgggctcgacgacagctctcaggagaaattcatcgga
ccattacccagagaagagtctgtggccggcacaagcaactatgtcagccagaactactcg
tactcctcccttctcagcaagtctgatacaggttacgtgggcctggtgaaccaagcgatg
acttgttacttgaacagcctcctgcaaaccctcttcatgaccccagagttccggaatgcg
ctgtacaagtgggagtttgaggagtcagaagaagatccagtctccagcatcccgtaccag
ctgcaaagactctttgttttactgcagacgagcaaaaagcgagcgatagaaaccacagac
gtgactcgcagctttggctgggacagcagtgaagcttggcagcagcatgacgttcaggaa
ctgtgccgggtcatgttcgatgctttggaacaaaaatggaagcagacagaacaggctgac
ctcatcaatcagctgtatcaaggaaagctaaaggactacgtgaaatgcttggaatgcggc
tacgaaagctggaggatcgatacgttccttgatattcctctagtcatccggccatacggc
tctaacacagcgtttggtagtatggaagaagcacttcatgcgtttatccagccggagacc
ctagatggacccaatcagtacttctgtgagcggtgcaagaggaaatgcgatgcacggaag
ggcctgaagttcctgcattttccatacctccttactctgcagctcaagaggtttgatttt
gattacaccagcatgcacaggatcaaactgaatgatcggatgacgtttcccgacgagcta
gacatgagcccgttcatagacatggaagacgagaagtctcctcaaacggatagctgcaca
gatagtggtgctgaaaatgagggcagttgccatagtgaccaaatgagcaacgatttttcc
actgatgacgcagttgatgagggaatctgtctggaaacaaacagcaatattgaaaagctg
aataaatctgtagcagaaaagaattccttgtatgaacttttttccgtgatggtccattca
gggagtgcagcggggggacattactacgcctgtataaaatcctttgctgatggccagtgg
tacagcttcaatgatcagcacgtaagcaggataacacaagaggacattaaaaaaacttat
ggtggggctacgggaaaccgcggctactactccagtgcctttgctagctctacaaatgca
tacatgctgatgtacagactgaagaacccagctagaaatgcacaattccttgaagcgagt
gaatttcctgagcacataaaacttctcgtgcaaaaggagcaggaacaggaagagcaggag
aagcgccagcgagagattgaacgcaacacatgcaaactcaagcttttctgcatgcacccg
gtcaagcagatcatgatggaaagtaaacttgaagttcacaaagataaaaccatgaaagaa
gccgttgagattgcgaacaagctcatggacttggaaggcgtgatccctctcgactgctgc
cggctagtgaagtatgatgaatttcacgattacctggagcgctcctacgaagacgaggag
gaccggacgatgggatatctgcttggaggcgtcaaatcgtcttatatgttcgacctattg
ttagaaaccaagagaccagaccaagtatttcagtcctataaacctggtgaggtcatggtc
aaagtgtacgtggtggatctaaagaccgaaaccgtagcttctcccgttagcgtccgcgcc
tatcttagtcagaccatcatcgagttcaagcagcttatctctaagagtgtcgatttgccg
ccggacagcatgcgcgttatcctggagcgatgttacaacgacttgcgccttttaaacgtg
gcgaataaaaccttgaaagcagaaggattcttcagaagcaataaggtgtttgtggaaagc
tccgactctctagaccaccagctggtttttaccgactctcatctgtggaaactcttggac
cgccacgccaacaccatcaagctttatgtgtctttacctgagcacccccgtccgacggcg
aggtccgtcggtccgaaagggggcggggatatgaatcctcaagaggactactgcagcagg
gcgaaatcggtggatgccattctggaagagagcacagagaagctaaagagcctgtctctt
cagcagcaccaagatggcggcaacggggacagcagcaagagcaccgaggggagcgatttc
gagaacattgattcgccactgaatgaggtggattcttcagggtcagccgacaaccgagaa
ctggaaaaccgaatcttgccggctgaccccgagaacaactttcagccggaagagcggtcg
gactctgacgtgaacaatgaccggagcaccagctcagtggatagcgatatcctcagctca
agccatagcagcgatactttgtgcaacgcagacggcacccccatccccctcgcaaatgga
ctcgactcccacagcatcaccagcagcaggcgatccaaagccaacgacggcaagaaagag
acgtgggacactgccgaggaggattctgggaccgatagcgagtacgacgagagcggaaaa
agcaggggagaggcgcaatatatgtattttaaagcggagccacatgcaggggagggttgc
ttagcggaaggaagtaaatgcctcctggtaaacgtggataagaggatcaccttagctgcc
ttcaaacagcaactggagtcttttgtgggtgtgccctcctcccagtttaaagttttccgg
gtctatgccagcaatcaggaatttgagagcgtccggctcaatgagacgctttcttctttt
tcagatgacaacaagatcaccatcagactcgggagagctctgaaaaaaggggaataccgg
gtcaaaatctttcagcttttagtaaacgagcccgagccttgcaagtttgtgttggacgca
gtgttttctaaaggaatgaccgtgcgacagtccaaagaggagctgttgccgctactcagg
gagcagtgtgggctggatctttctatagacaggttccggctgcgaaagaaaacgtggaag
aacccagggacagtatttctggattcccatgtttacgagaatgaaagtatttcgagctgc
tgggaggttttgttagaagcgctggacgaaactgagaaaatgaagtccatgtcgcagctc
tccttgtttacaaagaggtggaggccgtcggagttaaagctggacccctttaaggaggtt
gtgctggaaagtaacagcgtggaggagttaagagacaagatttgtgagataagtgctata
cccttggagaacttagaatttgctaagggtcgaggcacgttcccctgtgacatttccgtt
ttggagatccatcaggatttggactggaatcctaaagtgtcgacgctgaatgcttggccg
ctgtacatttcagacgatggagccgtcatattttaccgggataaaaccgaagaagtgatg
gaactgacggacgagcagagaaacgaattggtgaagaaggaaagcagccgcctgcaaaag
accggacaccgcgtcacctactccccccgaaaggaaaaagcactaaaaatatacctagac
gggccgaccaataaagactcggcgcaagactga

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