Xenopus laevis (African clawed frog): 495686
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Entry
495686 CDS
T01010
Symbol
usp47.L, usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
495686 (usp47.L)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
495686 (usp47.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
495686 (usp47.L)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
495686 (usp47.L)
Ubiquitin system [BR:
xla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
495686 (usp47.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
495686
NCBI-ProteinID:
NP_001088634
Xenbase:
XB-GENE-5760104
UniProt:
Q5U252
LinkDB
All DBs
Position
4L:4145765..4191121
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AA seq
1350 aa
AA seq
DB search
MRPGEESQLVPKEIENAADEPRVLCIVQDTTNCKSVNERITLNLPASTSVKQLYEDVSNK
AGYVSSTFSLMWGNGASNTDMAALDPTPDRTLQEAGFEAGKKNFLHLTDKDGEQPQLTSD
ESGTADSSGLDDSSQEKFIGPLPREESVAGTSNYVSQNYSYSSLLSKSDTGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVKCLECG
YESWRIDTFLDIPLVIRPYGSNTAFGSMEEALHAFIQPETLDGPNQYFCERCKRKCDARK
GLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPDELDMSPFIDMEDEKSPQTDSCT
DSGAENEGSCHSDQMSNDFSTDDAVDEGICLETNSNIEKLNKSVAEKNSLYELFSVMVHS
GSAAGGHYYACIKSFADGQWYSFNDQHVSRITQEDIKKTYGGATGNRGYYSSAFASSTNA
YMLMYRLKNPARNAQFLEASEFPEHIKLLVQKEQEQEEQEKRQREIERNTCKLKLFCMHP
VKQIMMESKLEVHKDKTMKEAVEIANKLMDLEGVIPLDCCRLVKYDEFHDYLERSYEDEE
DRTMGYLLGGVKSSYMFDLLLETKRPDQVFQSYKPGEVMVKVYVVDLKTETVASPVSVRA
YLSQTIIEFKQLISKSVDLPPDSMRVILERCYNDLRLLNVANKTLKAEGFFRSNKVFVES
SDSLDHQLVFTDSHLWKLLDRHANTIKLYVSLPEHPRPTARSVGPKGGGDMNPQEDYCSR
AKSVDAILEESTEKLKSLSLQQHQDGGNGDSSKSTEGSDFENIDSPLNEVDSSGSADNRE
LENRILPADPENNFQPEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADGTPIPLANG
LDSHSITSSRRSKANDGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYFKAEPHAGEGC
LAEGSKCLLVNVDKRITLAAFKQQLESFVGVPSSQFKVFRVYASNQEFESVRLNETLSSF
SDDNKITIRLGRALKKGEYRVKIFQLLVNEPEPCKFVLDAVFSKGMTVRQSKEELLPLLR
EQCGLDLSIDRFRLRKKTWKNPGTVFLDSHVYENESISSCWEVLLEALDETEKMKSMSQL
SLFTKRWRPSELKLDPFKEVVLESNSVEELRDKICEISAIPLENLEFAKGRGTFPCDISV
LEIHQDLDWNPKVSTLNAWPLYISDDGAVIFYRDKTEEVMELTDEQRNELVKKESSRLQK
TGHRVTYSPRKEKALKIYLDGPTNKDSAQD
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctggagaagagagtcagctggtgcccaaagagattgaaaatgcagccgacgag
ccaagagtactgtgcatcgtgcaagacaccaccaactgcaagagcgtaaacgaacgaatc
acgttaaacctcccggcgtccacctcggtgaaacaactgtacgaagacgtgtccaataag
gcgggatatgtttccagcacgttcagtctgatgtgggggaatggagccagtaacactgac
atggcggcgctggatccaaccccagacaggactttgcaagaggccggatttgaagcagga
aagaaaaacttccttcatttgacagataaagacggggaacagccacagctcacgtcggat
gaatcagggacagcagacagcagtgggctcgacgacagctctcaggagaaattcatcgga
ccattacccagagaagagtctgtggccggcacaagcaactatgtcagccagaactactcg
tactcctcccttctcagcaagtctgatacaggttacgtgggcctggtgaaccaagcgatg
acttgttacttgaacagcctcctgcaaaccctcttcatgaccccagagttccggaatgcg
ctgtacaagtgggagtttgaggagtcagaagaagatccagtctccagcatcccgtaccag
ctgcaaagactctttgttttactgcagacgagcaaaaagcgagcgatagaaaccacagac
gtgactcgcagctttggctgggacagcagtgaagcttggcagcagcatgacgttcaggaa
ctgtgccgggtcatgttcgatgctttggaacaaaaatggaagcagacagaacaggctgac
ctcatcaatcagctgtatcaaggaaagctaaaggactacgtgaaatgcttggaatgcggc
tacgaaagctggaggatcgatacgttccttgatattcctctagtcatccggccatacggc
tctaacacagcgtttggtagtatggaagaagcacttcatgcgtttatccagccggagacc
ctagatggacccaatcagtacttctgtgagcggtgcaagaggaaatgcgatgcacggaag
ggcctgaagttcctgcattttccatacctccttactctgcagctcaagaggtttgatttt
gattacaccagcatgcacaggatcaaactgaatgatcggatgacgtttcccgacgagcta
gacatgagcccgttcatagacatggaagacgagaagtctcctcaaacggatagctgcaca
gatagtggtgctgaaaatgagggcagttgccatagtgaccaaatgagcaacgatttttcc
actgatgacgcagttgatgagggaatctgtctggaaacaaacagcaatattgaaaagctg
aataaatctgtagcagaaaagaattccttgtatgaacttttttccgtgatggtccattca
gggagtgcagcggggggacattactacgcctgtataaaatcctttgctgatggccagtgg
tacagcttcaatgatcagcacgtaagcaggataacacaagaggacattaaaaaaacttat
ggtggggctacgggaaaccgcggctactactccagtgcctttgctagctctacaaatgca
tacatgctgatgtacagactgaagaacccagctagaaatgcacaattccttgaagcgagt
gaatttcctgagcacataaaacttctcgtgcaaaaggagcaggaacaggaagagcaggag
aagcgccagcgagagattgaacgcaacacatgcaaactcaagcttttctgcatgcacccg
gtcaagcagatcatgatggaaagtaaacttgaagttcacaaagataaaaccatgaaagaa
gccgttgagattgcgaacaagctcatggacttggaaggcgtgatccctctcgactgctgc
cggctagtgaagtatgatgaatttcacgattacctggagcgctcctacgaagacgaggag
gaccggacgatgggatatctgcttggaggcgtcaaatcgtcttatatgttcgacctattg
ttagaaaccaagagaccagaccaagtatttcagtcctataaacctggtgaggtcatggtc
aaagtgtacgtggtggatctaaagaccgaaaccgtagcttctcccgttagcgtccgcgcc
tatcttagtcagaccatcatcgagttcaagcagcttatctctaagagtgtcgatttgccg
ccggacagcatgcgcgttatcctggagcgatgttacaacgacttgcgccttttaaacgtg
gcgaataaaaccttgaaagcagaaggattcttcagaagcaataaggtgtttgtggaaagc
tccgactctctagaccaccagctggtttttaccgactctcatctgtggaaactcttggac
cgccacgccaacaccatcaagctttatgtgtctttacctgagcacccccgtccgacggcg
aggtccgtcggtccgaaagggggcggggatatgaatcctcaagaggactactgcagcagg
gcgaaatcggtggatgccattctggaagagagcacagagaagctaaagagcctgtctctt
cagcagcaccaagatggcggcaacggggacagcagcaagagcaccgaggggagcgatttc
gagaacattgattcgccactgaatgaggtggattcttcagggtcagccgacaaccgagaa
ctggaaaaccgaatcttgccggctgaccccgagaacaactttcagccggaagagcggtcg
gactctgacgtgaacaatgaccggagcaccagctcagtggatagcgatatcctcagctca
agccatagcagcgatactttgtgcaacgcagacggcacccccatccccctcgcaaatgga
ctcgactcccacagcatcaccagcagcaggcgatccaaagccaacgacggcaagaaagag
acgtgggacactgccgaggaggattctgggaccgatagcgagtacgacgagagcggaaaa
agcaggggagaggcgcaatatatgtattttaaagcggagccacatgcaggggagggttgc
ttagcggaaggaagtaaatgcctcctggtaaacgtggataagaggatcaccttagctgcc
ttcaaacagcaactggagtcttttgtgggtgtgccctcctcccagtttaaagttttccgg
gtctatgccagcaatcaggaatttgagagcgtccggctcaatgagacgctttcttctttt
tcagatgacaacaagatcaccatcagactcgggagagctctgaaaaaaggggaataccgg
gtcaaaatctttcagcttttagtaaacgagcccgagccttgcaagtttgtgttggacgca
gtgttttctaaaggaatgaccgtgcgacagtccaaagaggagctgttgccgctactcagg
gagcagtgtgggctggatctttctatagacaggttccggctgcgaaagaaaacgtggaag
aacccagggacagtatttctggattcccatgtttacgagaatgaaagtatttcgagctgc
tgggaggttttgttagaagcgctggacgaaactgagaaaatgaagtccatgtcgcagctc
tccttgtttacaaagaggtggaggccgtcggagttaaagctggacccctttaaggaggtt
gtgctggaaagtaacagcgtggaggagttaagagacaagatttgtgagataagtgctata
cccttggagaacttagaatttgctaagggtcgaggcacgttcccctgtgacatttccgtt
ttggagatccatcaggatttggactggaatcctaaagtgtcgacgctgaatgcttggccg
ctgtacatttcagacgatggagccgtcatattttaccgggataaaaccgaagaagtgatg
gaactgacggacgagcagagaaacgaattggtgaagaaggaaagcagccgcctgcaaaag
accggacaccgcgtcacctactccccccgaaaggaaaaagcactaaaaatatacctagac
gggccgaccaataaagactcggcgcaagactga
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