Xenopus laevis (African clawed frog): 495824
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Entry
495824 CDS
T01010
Symbol
zmat2.L, snu23, zmat2
Name
(RefSeq) zinc finger matrin-type 2 L homeolog
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
495824 (zmat2.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
495824 (zmat2.L)
Spliceosome [BR:
xla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
495824 (zmat2.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
SNRNP27
Cgr1
C2H2-zf_KIN17
MG280
DUF6277
DUF4250
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
495824
NCBI-ProteinID:
NP_001088651
Xenbase:
XB-GENE-1217482
UniProt:
Q5RK37
A0A974DBM1
LinkDB
All DBs
Position
3L:32894302..32913696
Genome browser
AA seq
199 aa
AA seq
DB search
MASGSGSKNADFRRKWDKDDYEKLAQKRITEEREKKDGKPVQPIKRELLRHRDYKVDLES
KLGKTIVITKTTPQSDMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLD
QVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKARAYKKEKQREKKRKAEEDLGFEED
DEMAAVMGFSGFGSSKKGH
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggaagcggatcgaaaaatgcagacttccgtcggaagtgggacaaagatgac
tatgagaaacttgcacagaagcgaattacagaagaaagagaaaagaaagatggcaaacct
gtacaacccattaaaagagaattactccgacacagagactataaggtggacctggagtcc
aagctgggaaagaccattgtcattacaaagaccactccacagtctgatatgggaggctac
tattgcaatgtttgtgactgtgtggtgaaagattcaatcaacttcttggaccatatcaat
ggcaaaaaacatcaaaggaacttgggaatgtccatgagagtagaacgctcaacgctggat
caagtcaagaaacgatttgaggttaataagaaaaaaatggaagaaaagcagaaggactac
gactttgaagagcgaatgaaagagctccgggaagaggaagaaaaagcacgagcatataag
aaagagaagcagagggagaaaaagcgaaaagcagaagaagatctgggatttgaagaggat
gatgaaatggctgctgtcatgggtttctcaggctttgggtcatcaaaaaagggtcactag
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