Xenopus laevis (African clawed frog): 495838
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Entry
495838 CDS
T01010
Symbol
atg16l1.L
Name
(RefSeq) autophagy-related protein 16 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
xla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
495838 (atg16l1.L)
04136 Autophagy - other
495838 (atg16l1.L)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
495838 (atg16l1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
495838 (atg16l1.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
495838 (atg16l1.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
495838 (atg16l1.L)
Others
Specific organelles associated proteins
Auto phagosome
495838 (atg16l1.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
495838 (atg16l1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
WD40_RFWD3
WDR90_beta-prop_4th
eIF2A
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_SPT8
Beta-prop_VPS8
CCDC93_CC
ZapB
V_ATPase_I
HEF_HK
DUF7310
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
495838
NCBI-ProteinID:
XP_018119367
Xenbase:
XB-GENE-17330260
UniProt:
A0A1L8GB11
A0A974HKD9
LinkDB
All DBs
Position
5L:complement(135939784..135963853)
Genome browser
AA seq
622 aa
AA seq
DB search
MAASCRTPAYPSWRLHIASELSRRDREQRQVFEELILQYNRLLEKSDLQSVLADKLQTEK
YEQQSRHDSSPGPDGMRNDAILQDMAQMRIKHQEELTELHKKRGELAQTVIELNNQMQQK
DKEIQANEEKISKYLQTIQDLETECQDLRNKLQELERANQTLKDEYDALQITFTALEDKL
RKTTEDNQELVSRWMAEKAQEANKLNAENEKDSKRRQARLQKELAEAAKEPLSFDHDDDI
EVLNDNADPVGDGAGAQATGRIISKRNSQPAAGGLLDSITNIFGLSESPSLSHRSDNSRR
RSLNSFPTSHDCADSQAAGNREVRVPATAVYSFDAHDGEVNAVRFSPGSRLLATGGMDRR
VKLWDVIGNKCEAKGSLTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLT
GHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIICTEQCVMSG
HFDKKIRFWDIRTECIVRELELQGKITALDLNPERTQLLSCSRDDLIKITDLRANAVQQT
FSAPGFKCGSDWTRVIFSPDGNYVSAGSAEGTLYFWNVLTGKMERMFSKQHSSSINAVAW
SPSGTHVVSVDRGSRGVLWSDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagttgcaggactcccgcttatccttcctggaggcttcacatcgccagtgag
ctgagtcggcgagaccgggagcagagacaggtgtttgaggagctcatcttacagtataac
cggctgctggaaaagtcagaccttcagtctgttttggctgacaagctgcaaacagagaaa
tatgagcagcagagccgccatgacagcagcccaggtccagatgggatgcgtaatgatgcg
atactgcaggacatggcccagatgaggataaaacaccaggaggaacttaccgaacttcat
aagaaaagaggggagctcgctcaaacagttatagagctgaacaatcagatgcaacaaaaa
gacaaagaaatccaagcaaatgaagaaaagatatctaagtacttgcagacaatccaagat
ctggaaactgaatgccaggacttaaggaacaaactgcaagaacttgaacgtgccaatcag
accctcaaagacgagtacgacgctctgcagataacatttactgctctggaagataaatta
cggaagactacagaggacaaccaggagctggtgtcacgctggatggcagagaaagctcaa
gaggccaataagcttaatgcagagaatgagaaggactcaaagagaagacaggcccgactt
cagaaagagctagctgaagcagccaaggaacctttgtcttttgatcatgatgatgatata
gaggtgctgaatgataatgcagaccctgtgggagacggtgctggtgcacaagccacaggc
cggatcatcagtaagcgaaactctcaacctgccgcaggaggcctcctggactctatcact
aatatcttcggcttgtctgagtctccctccttgagtcatcgttctgacaattccaggaga
cggtccttaaattctttccctacctcgcacgactgtgcagattcccaggcagctggaaac
agagaggtcagggttccggctacagcggtttattcatttgatgctcatgatggagaagtt
aatgctgtgcgattcagcccaggctcccgtttactggcaacaggtggaatggaccggagg
gtgaaactctgggatgttattggaaataaatgtgaggcaaagggttcattaacaggcagc
aatgcaggcatcaccagcatagagtttgacagcgctggttcctaccttttggctgcttca
aatgactttgcaagtagaatctggacagtggatgattacagacttcggcatactctaact
ggacatagtgggaaagtactatctgccaaattcctgctggacaatgcccgcattgtgtct
ggaagtcatgataggacgttgaagttgtgggatctgcgcagcaaagtttgcattaagaca
gtgtttgctggttctagctgtaatgacattatttgcacggagcagtgtgttatgagtggt
cacttcgataaaaagattcggttttgggatataagaacagaatgtatcgtgcgagaactg
gagttgcagggcaaaatcacggctctagatttgaatcctgaaaggacacagctacttagc
tgttctcgggatgaccttatcaaaatcactgacttgcgtgccaatgctgtgcaacaaacc
ttcagtgccccagggtttaagtgtggatcagactggactcgggttatatttagccctgat
ggcaattatgtgtcggctggttcggcagaaggaacactttatttctggaatgtccttaca
ggaaaaatggagaggatgtttagcaaacaacacagttcatctatcaatgctgtggcttgg
tcaccttctgggacacacgtggtcagcgttgaccgaggaagccgtggagtcttgtggtct
gacttttga
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