KEGG   Xenopus laevis (African clawed frog): 495944
Entry
495944            CDS       T01010                                 
Symbol
rnf4.S, res4-26, rnf4-a, rnf4-b, slx5, snurf
Name
(RefSeq) ring finger protein 4 S homeolog
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    495944 (rnf4.S)
Enzymes [BR:xla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     495944 (rnf4.S)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    495944 (rnf4.S)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf_RING_Vps8 zf-rbx1 zf-RING_4 zf-UDP zf-C3HC4_4 Rtf2 zf-RING_16 zf-RING_11 zf-RING_6 Sina_RING FYVE zf-ANAPC11 zf-Nse zf-RING_10 zf-RING_Vps41 IBR_1 GT-C_AftD DZR
Other DBs
NCBI-GeneID: 495944
NCBI-ProteinID: NP_001088681
Xenbase: XB-GENE-6078758
UniProt: Q5PQ91 A0A974DSH8
LinkDB
Position
1S:13059375..13076631
AA seq 190 aa
MSTAQRKRKGAEPGLSKSRKRRAPGSTATMAAETEAIELESGEEVVDLTCESTEPVVVDL
TNNDLSINDSVVIVEDTPRQRRTVSRTSHQTSSCVLSSDDEGSRDTELFATNKDISSPGY
GSSRSSSGKVSCPICMDSYSEIVQSRRLIVSTKCGHIFCSQCLRDALKNALSCPTCRKKL
NNKQYHPIYV
NT seq 573 nt   +upstreamnt  +downstreamnt
atgagcacggctcaaagaaagcgtaaaggagctgagcctggtctctcgaaatcacgcaag
agaagagctccaggttccacagccacaatggcagcagagacagaggccattgaactggaa
agcggggaagaagttgtggatcttacatgcgaatccacggaaccagtggttgtcgatttg
acgaacaatgacttgagcatcaatgactctgttgttattgttgaagatacccccaggcaa
agaaggaccgtatccagaacgtcacatcaaacgtccagctgtgtattaagtagcgatgat
gaaggatcaagagacactgagctatttgcaacaaataaagatatttcctcaccaggctat
ggtagttcaagatcttcttcgggaaaagtgagttgtccgatttgcatggatagctattca
gagattgtacagagtaggcgcctgattgtgtcaaccaaatgtggccatatcttctgcagc
cagtgcctccgagacgctcttaaaaatgctctttcatgcccgacttgcaggaaaaaactt
aataacaaacaatatcaccctatatacgtatga

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