KEGG   Xenopus laevis (African clawed frog): 496021
Entry
496021            CDS       T01010                                 
Symbol
tuba1l.S, tubal3, tubal3.S
Name
(RefSeq) tubulin alpha 1 like S homeolog
  KO
K07374  tubulin alpha
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04145  Phagosome
xla04210  Apoptosis
xla04530  Tight junction
xla04540  Gap junction
xla04814  Motor proteins
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    496021 (tuba1l.S)
  09143 Cell growth and death
   04210 Apoptosis
    496021 (tuba1l.S)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    496021 (tuba1l.S)
   04540 Gap junction
    496021 (tuba1l.S)
  09142 Cell motility
   04814 Motor proteins
    496021 (tuba1l.S)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    496021 (tuba1l.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    496021 (tuba1l.S)
   03036 Chromosome and associated proteins [BR:xla03036]
    496021 (tuba1l.S)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    496021 (tuba1l.S)
   04147 Exosome [BR:xla04147]
    496021 (tuba1l.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     496021 (tuba1l.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     496021 (tuba1l.S)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    496021 (tuba1l.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   496021 (tuba1l.S)
  Exosomal proteins of other body fluids (saliva and urine)
   496021 (tuba1l.S)
  Exosomal proteins of colorectal cancer cells
   496021 (tuba1l.S)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 496021
NCBI-ProteinID: NP_001088757
Xenbase: XB-GENE-5845607
UniProt: Q5PQ08
LinkDB
Position
9_10S:complement(52815204..52820088)
AA seq 441 aa
MHVGQAGVQIGNACWELYCLEHGILPDGRLLTDIIRDEDESFSTFFNETSGGKYVPHAVF
VDLEPTVIDEVRKGAYRKLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLERIRKMAD
QCNALQGFLIFHSFGGGTGSGFSSLLMERLSVEYGRKSKLEFSIYPAPKMSTAVVEPYNS
VLTTHTTLEHSDCAFLVDNEAIYDICHRNLDIECPTHTNLNRLIAQIVSSITASLRFDGA
LNVDLAEFQTNLVPFPRIHFPVVSYAPVISAERAYHEKLSIAEITNACFEPANQMVKCNP
RNGKYMACCMLYRGDVVPKDVNVAIASIKSKRTIQFVDWCPTGFKIGINYQPPTVVPGGD
QAQMQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA
LEKDYDEIACDYVEEEDGEEA
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcacgtggggcaggccggagtgcagattggcaatgcatgctgggagctgtactgcctg
gaacacgggatcctgccagatggacgactgctcactgacataatcagagatgaggatgaa
tctttcagcactttcttcaatgagaccagcgggggtaaatatgtaccccatgccgtgttt
gtggatctggagccaactgtcatagatgaagtccgaaaaggagcctatcggaagcttttc
caccctgaacagctcatttcaggcaaggaagacgctgccaataattatgctcgtggccat
tacaccatcggcaaagagattattgactcggtgctggaaagaatccgaaagatggcagat
cagtgcaatgcacttcagggcttccttattttccacagctttggagggggcactggttct
ggtttctcttccctactaatggaacgtctctctgttgaatacggcagaaaatccaagttg
gaattctcaatttatccagctcctaaaatgtccacggccgtggtggaaccctataactct
gtcctcaccactcacacaaccctggagcattcggactgtgctttcctggtggacaatgaa
gccatttatgacatctgtcataggaaccttgatattgaatgtccaactcacaccaacctg
aatcgtctgattgcccagattgtgtcctctatcacagcttctctcagatttgatggagct
ctgaatgtggacctagcagaattccaaaccaacttggtgccattcccacgcatccatttt
cctgtggtttcctatgctccagttatctctgctgagagagcttaccatgagaagctttcc
atagctgagataacaaatgcttgctttgagccagctaaccagatggtgaaatgtaaccca
cgaaatggaaaatacatggcttgctgtatgctctaccgtggtgatgtggttcccaaagat
gtcaatgttgccattgcaagcatcaaatccaagcgcactatccagtttgtggactggtgc
ccaacaggtttcaagattggtatcaactaccagcccccaactgtggttcctggaggagac
caagcccagatgcagcgtgctgtgtgcatgttgagcaacaccaccgccattgctgaggcc
tgggctcgtctggatcacaagtttgaccttatgtatgctaagcgtgcctttgtgcactgg
tatgtaggggagggaatggaggaaggggagttctccgaggcccgtgaagatatggctgcc
ctggaaaaagattatgatgagattgcttgtgactatgtggaggaggaggatggagaagaa
gcctaa

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