Xenopus laevis (African clawed frog): 496021
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Entry
496021 CDS
T01010
Symbol
tuba1l.S, tubal3, tubal3.S
Name
(RefSeq) tubulin alpha 1 like S homeolog
KO
K07374
tubulin alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04145
Phagosome
xla04210
Apoptosis
xla04530
Tight junction
xla04540
Gap junction
xla04814
Motor proteins
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
496021 (tuba1l.S)
09143 Cell growth and death
04210 Apoptosis
496021 (tuba1l.S)
09144 Cellular community - eukaryotes
04530 Tight junction
496021 (tuba1l.S)
04540 Gap junction
496021 (tuba1l.S)
09142 Cell motility
04814 Motor proteins
496021 (tuba1l.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
496021 (tuba1l.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
496021 (tuba1l.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
496021 (tuba1l.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
496021 (tuba1l.S)
04147 Exosome [BR:
xla04147
]
496021 (tuba1l.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
496021 (tuba1l.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
496021 (tuba1l.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
496021 (tuba1l.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
496021 (tuba1l.S)
Exosomal proteins of other body fluids (saliva and urine)
496021 (tuba1l.S)
Exosomal proteins of colorectal cancer cells
496021 (tuba1l.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
496021
NCBI-ProteinID:
NP_001088757
Xenbase:
XB-GENE-5845607
UniProt:
Q5PQ08
LinkDB
All DBs
Position
9_10S:complement(52815204..52820088)
Genome browser
AA seq
441 aa
AA seq
DB search
MHVGQAGVQIGNACWELYCLEHGILPDGRLLTDIIRDEDESFSTFFNETSGGKYVPHAVF
VDLEPTVIDEVRKGAYRKLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLERIRKMAD
QCNALQGFLIFHSFGGGTGSGFSSLLMERLSVEYGRKSKLEFSIYPAPKMSTAVVEPYNS
VLTTHTTLEHSDCAFLVDNEAIYDICHRNLDIECPTHTNLNRLIAQIVSSITASLRFDGA
LNVDLAEFQTNLVPFPRIHFPVVSYAPVISAERAYHEKLSIAEITNACFEPANQMVKCNP
RNGKYMACCMLYRGDVVPKDVNVAIASIKSKRTIQFVDWCPTGFKIGINYQPPTVVPGGD
QAQMQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA
LEKDYDEIACDYVEEEDGEEA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtggggcaggccggagtgcagattggcaatgcatgctgggagctgtactgcctg
gaacacgggatcctgccagatggacgactgctcactgacataatcagagatgaggatgaa
tctttcagcactttcttcaatgagaccagcgggggtaaatatgtaccccatgccgtgttt
gtggatctggagccaactgtcatagatgaagtccgaaaaggagcctatcggaagcttttc
caccctgaacagctcatttcaggcaaggaagacgctgccaataattatgctcgtggccat
tacaccatcggcaaagagattattgactcggtgctggaaagaatccgaaagatggcagat
cagtgcaatgcacttcagggcttccttattttccacagctttggagggggcactggttct
ggtttctcttccctactaatggaacgtctctctgttgaatacggcagaaaatccaagttg
gaattctcaatttatccagctcctaaaatgtccacggccgtggtggaaccctataactct
gtcctcaccactcacacaaccctggagcattcggactgtgctttcctggtggacaatgaa
gccatttatgacatctgtcataggaaccttgatattgaatgtccaactcacaccaacctg
aatcgtctgattgcccagattgtgtcctctatcacagcttctctcagatttgatggagct
ctgaatgtggacctagcagaattccaaaccaacttggtgccattcccacgcatccatttt
cctgtggtttcctatgctccagttatctctgctgagagagcttaccatgagaagctttcc
atagctgagataacaaatgcttgctttgagccagctaaccagatggtgaaatgtaaccca
cgaaatggaaaatacatggcttgctgtatgctctaccgtggtgatgtggttcccaaagat
gtcaatgttgccattgcaagcatcaaatccaagcgcactatccagtttgtggactggtgc
ccaacaggtttcaagattggtatcaactaccagcccccaactgtggttcctggaggagac
caagcccagatgcagcgtgctgtgtgcatgttgagcaacaccaccgccattgctgaggcc
tgggctcgtctggatcacaagtttgaccttatgtatgctaagcgtgcctttgtgcactgg
tatgtaggggagggaatggaggaaggggagttctccgaggcccgtgaagatatggctgcc
ctggaaaaagattatgatgagattgcttgtgactatgtggaggaggaggatggagaagaa
gcctaa
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integrated database retrieval system