Xenopus laevis (African clawed frog): 496079
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Entry
496079 CDS
T01010
Symbol
lrfn4.L, figler6, lrfn4, lrfn5, salm3
Name
(RefSeq) leucine rich repeat and fibronectin type III domain containing 4 L homeolog precursor
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
496079 (lrfn4.L)
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
496079 (lrfn4.L)
Cell adhesion molecules [BR:
xla04515
]
Immunoglobulin superfamily
SALM family
496079 (lrfn4.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
496079 (lrfn4.L)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
LRR_5
ig
Ig_2
fn3
LRRCT
LRR_9
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
496079
NCBI-ProteinID:
NP_001088811
Xenbase:
XB-GENE-6252814
UniProt:
Q5PPU2
A0A974D2Z6
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Position
4L:complement(31071945..31087366)
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AA seq
722 aa
AA seq
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MEKLFWGVLLVGSLVKVAHTCPFHCTCQNLSESLSTLCANKGLLYVPPNIDRRTVELRLA
DNFIRVVEQEDFLNMTGLVDLTLSRNTIDNIKPYAFGDLESLRSLHLDGNRLTSIHEEAL
RGMLNLQHLIINNNQLVTIPVATFDDFLLTLEDLDLSYNNLVSVPWESIQNMVSLHTLNL
DHNLIESVMEGTFSELYKLSRLDMTSNRLHTLPPDPLFVRSQTGVISPTPYTSTIVLNFG
GNPFHCNCELLWLRRLVREDDMETCASPPQLAGRYFWSIPEEEFTCEPPLITRHTHQLWV
LEGQRATLKCRAIGDPEPVIHWVSPDDKIMPNSSRTASYRNGTLDILVTTIRDDGSYTCI
AINAAGESTAQVDLKMIPLPHRNNGSIDVLRQDPGSSDITTSSKASTNSTEEKRLPENTV
IVSDVTSSSALVRWFMNRSAYIVWMYQIQYNCTADETLVYRILPSTTKHFALKHLVSGVD
YDLCILAISDDVATSLAATRSLGCVQFTTGETYPDCRSLHAHFLGGTLTIIIGGIIVVTL
LVFTVGMMVKYKVCSSTLAGIPKVTNVYSQTNGSQLVNNGLPLQYRMNNDSAKPSCSNIT
YREDTGRIVHGVKPQRRKARHREVKEREENKSTVESEVARAAQGSSPEDYIVFGVPKAKR
SCSVDMGEMATTTCYSYAKRLSIIWTKRSQSVHGMLSNCGTELSKGKQVLFSSSDELEES
VV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttgttctggggtgtcctgttggtaggaagccttgtgaaagttgcccatact
tgcccctttcactgcacctgtcagaatctctcagaatccctaagcacactttgtgctaat
aaaggacttttatatgttccccctaacattgaccgcaggactgtagaattaaggctggct
gacaattttatccgtgtagtagagcaagaagatttccttaacatgactgggcttgtggac
ctcacattatccagaaataccattgacaatatcaaaccttatgcttttggcgacctggaa
agtctacgatctctacacttagatggcaatcgtcttacatcgatacatgaagaagcctta
agggggatgcttaaccttcagcatctaataattaataacaaccaactagtgacaattcca
gtagcaacatttgatgatttccttcttaccttggaagacctagatttgtcttataacaac
ttagttagtgtaccatgggagtctattcaaaatatggtcagtcttcacactctcaacctt
gaccataatctaatagaatctgtaatggaaggaactttttcagagctgtataaactctca
aggttggatatgacatctaacagacttcatacactacctccagacccactctttgtccgt
tctcaaactggggtaattagcccaactccttatacatccaccattgtgctcaactttgga
ggtaatccatttcactgcaattgtgagctcctctggttacgccgcctggttagagaagat
gatatggaaacttgtgcttctcctcctcagttggctggacgctatttttggtctatacca
gaagaagagtttacctgtgagccccctctcatcacccgtcatacacatcaactgtgggtg
ttagaagggcagagagcaacccttaagtgccgggctataggagacccagagccagttatc
cactgggtatctccagatgataagattatgccaaattcctccagaacagcttcatacaga
aatgggactttagacattttggttactacaatcagggatgatggatcatacacttgtata
gccataaatgctgctggagaatcaacagcccaggtggatttaaaaatgattcctttgccc
catcgtaacaatgggagtattgatgttttaagacaggacccagggtcatctgacattact
acatcatctaaagcatctacaaattccacagaggagaaaagattgccagaaaatactgtt
atagtttcagatgtaacttcttcatctgccttggttcgttggttcatgaacagatcagcc
tacatagtgtggatgtatcagattcagtataattgcacagctgatgaaacacttgtgtac
aggatcctgccatctacaaccaagcactttgccttaaagcacttggtatcgggagtggat
tacgacctttgcatactggccatttctgatgatgtggccacctccttagcagctactaga
tcactggggtgtgttcagttcactactggagagacatacccagactgccggtctttgcat
gctcatttccttgggggtaccttaaccatcatcatagggggaatcattgtagtcacattg
ttggtctttacagtgggcatgatggtcaaatataaggtttgcagtagcacccttgcaggc
atacccaaggttactaatgtttactcacagaccaatggaagtcagctggttaacaacgga
ttgcctcttcaatataggatgaacaatgattctgctaaacctagctgctccaacataact
tatagagaggatacaggaaggattgtgcatggtgtcaagccacaaagaagaaaggccaga
cacagagaagtaaaagagagagaagagaacaaaagcactgtggaatcagaagtggctagg
gcagcacaaggttccagtccagaagattatattgtttttggtgttccaaaagccaagcgc
agttgctctgtggatatgggggagatggcaactactacttgttatagttatgcaaagcga
ctaagtattatatggacaaaacgaagtcagtctgtgcatggcatgctctcaaattgcggg
acggagttatccaagggaaagcaagtgttattttctagctctgatgagcttgaagaaagt
gtggtgtag
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