Xenopus laevis (African clawed frog): 496250
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Entry
496250 CDS
T01010
Symbol
optn.L, optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
496250 (optn.L)
04137 Mitophagy - animal
496250 (optn.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
496250 (optn.L)
Membrane trafficking [BR:
xla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
496250 (optn.L)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
496250 (optn.L)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
496250 (optn.L)
Xenophagy
Cargo receptors
496250 (optn.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
Taxilin
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
496250
NCBI-ProteinID:
NP_001088901
Xenbase:
XB-GENE-943661
UniProt:
Q5M7B7
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All DBs
Position
3L:complement(87804307..87822091)
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AA seq
532 aa
AA seq
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MENELLNHPHNNNMVNGHQDAPYDALSMKNDAEMLEQIKQLLMENNNLKETMKQMNQEMK
ERLEELLKRHNQHLLDLNSANEVLRKELQSLKEKIATSNQGSAVCSTSEEASENKQLKNQ
LTRLQAEKADLLGLISELQLKLGSFSEDSFVEIGFSERESGEIVNEEKANKILSDHNISY
RTNSIKEEGGGTEPEEVAISRLLRSLREETQKVERLEKELFSANKRLAELEKQTSEFCDK
GVQTEQESEQSQSEVIISSEVDILKEKVKSLNKELQETNDKLNEAKQFKNSLQEKCILLD
KRLQENQVDLEEKQSLRYSIKKLELQVESQESEIKLEQNKTEAEKNQLGILQVSYDKLNS
EYQELRIREIEKVSKVEFNELLEKLDVCEKALAKKQFEIDEMREMDTKHEEDKETIELLR
AQVDVYCADFHAERSARENIHQEKEQLATRLAYMIQEYEKLKEEMMGKQSIEQLQRRHGA
TSLLDASEGPYLVARGAANMEQPSITVYTCPKCNLTVPDMDTLQIHVMDCIT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgaattgttaaaccatcctcataataataacatggtaaatggacatcaggat
gctccctatgatgctcttagcatgaagaatgatgcagaaatgctggaacagataaaacag
cttctaatggaaaataataatctaaaagaaaccatgaagcaaatgaatcaggagatgaaa
gaacgccttgaagagctcttaaagagacataatcagcatttgttagacttgaacagtgca
aacgaggtgttgaggaaggaattgcaaagtttaaaagaaaagattgccacatctaaccaa
ggttcggcagtttgctctacttctgaggaagcaagtgaaaacaaacagctgaagaatcag
ttaacgcgtttacaggcggagaaagccgacctacttggtctaatatcagaattgcagctg
aaactcggcagtttttctgaagactcatttgtggaaatcggattttctgaaagggaatct
ggtgaaatagtgaatgaagaaaaggcaaataaaatattgtctgaccataatatttcatat
aggacaaattctatcaaggaagaagggggtggcactgaaccagaagaggtggcaatcagc
aggcttcttcgcagtctaagagaggaaactcaaaaagtggagagacttgagaaggaatta
tttagtgcaaataaaaggttggcagaactagaaaaacaaacctctgaattctgtgacaag
ggcgtgcaaacagagcaagaatctgaacagagtcaatctgaagtgattatttctagtgaa
gtagatatactaaaggagaaagtgaagtcactaaataaagaactccaggaaaccaatgat
aaattaaatgaggccaaacagttcaagaacagtcttcaagaaaagtgcattttgctagat
aagagacttcaagaaaaccaggttgatttggaggaaaagcaaagtcttagatattctata
aagaaattagaactccaagtggaaagtcaagagtctgaaatcaaactagaacaaaacaaa
acagaggctgaaaaaaatcaactaggcatcttgcaggtttcatatgataaacttaactca
gaatatcaggaactaaggattagagagattgaaaaagtttccaaagttgagtttaatgag
ctgcttgaaaagctggatgtatgtgaaaaggcacttgcaaaaaaacaatttgaaattgat
gaaatgagagaaatggacacaaaacacgaggaggataaagaaacaattgaacttcttcgt
gctcaggttgacgtgtactgtgcagatttccatgctgaaagatcagcaagagaaaacatt
catcaagagaaggagcagttagcaactcgtctggcatatatgatacaagaatatgaaaaa
ctgaaggaagaaatgatgggcaagcagtcaatagagcagctccagaggcgccatggtgcc
acaagcttattggatgccagtgagggtccttatttagtggcaagaggggcagccaacatg
gagcagccaagtattactgtgtatacatgtccaaaatgtaacctgactgttccagacatg
gatacgctgcagattcacgtcatggactgtatcacctaa
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