KEGG   Xenopus laevis (African clawed frog): 496250
Entry
496250            CDS       T01010                                 
Symbol
optn.L, optn
Name
(RefSeq) optineurin
  KO
K19946  optineurin
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04137  Mitophagy - animal
xla04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    496250 (optn.L)
   04137 Mitophagy - animal
    496250 (optn.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    496250 (optn.L)
Membrane trafficking [BR:xla04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    496250 (optn.L)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    496250 (optn.L)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    496250 (optn.L)
  Xenophagy
   Cargo receptors
    496250 (optn.L)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 Taxilin zf-C2H2
Other DBs
NCBI-GeneID: 496250
NCBI-ProteinID: NP_001088901
Xenbase: XB-GENE-943661
UniProt: Q5M7B7
LinkDB
Position
3L:complement(87804307..87822091)
AA seq 532 aa
MENELLNHPHNNNMVNGHQDAPYDALSMKNDAEMLEQIKQLLMENNNLKETMKQMNQEMK
ERLEELLKRHNQHLLDLNSANEVLRKELQSLKEKIATSNQGSAVCSTSEEASENKQLKNQ
LTRLQAEKADLLGLISELQLKLGSFSEDSFVEIGFSERESGEIVNEEKANKILSDHNISY
RTNSIKEEGGGTEPEEVAISRLLRSLREETQKVERLEKELFSANKRLAELEKQTSEFCDK
GVQTEQESEQSQSEVIISSEVDILKEKVKSLNKELQETNDKLNEAKQFKNSLQEKCILLD
KRLQENQVDLEEKQSLRYSIKKLELQVESQESEIKLEQNKTEAEKNQLGILQVSYDKLNS
EYQELRIREIEKVSKVEFNELLEKLDVCEKALAKKQFEIDEMREMDTKHEEDKETIELLR
AQVDVYCADFHAERSARENIHQEKEQLATRLAYMIQEYEKLKEEMMGKQSIEQLQRRHGA
TSLLDASEGPYLVARGAANMEQPSITVYTCPKCNLTVPDMDTLQIHVMDCIT
NT seq 1599 nt   +upstreamnt  +downstreamnt
atggagaatgaattgttaaaccatcctcataataataacatggtaaatggacatcaggat
gctccctatgatgctcttagcatgaagaatgatgcagaaatgctggaacagataaaacag
cttctaatggaaaataataatctaaaagaaaccatgaagcaaatgaatcaggagatgaaa
gaacgccttgaagagctcttaaagagacataatcagcatttgttagacttgaacagtgca
aacgaggtgttgaggaaggaattgcaaagtttaaaagaaaagattgccacatctaaccaa
ggttcggcagtttgctctacttctgaggaagcaagtgaaaacaaacagctgaagaatcag
ttaacgcgtttacaggcggagaaagccgacctacttggtctaatatcagaattgcagctg
aaactcggcagtttttctgaagactcatttgtggaaatcggattttctgaaagggaatct
ggtgaaatagtgaatgaagaaaaggcaaataaaatattgtctgaccataatatttcatat
aggacaaattctatcaaggaagaagggggtggcactgaaccagaagaggtggcaatcagc
aggcttcttcgcagtctaagagaggaaactcaaaaagtggagagacttgagaaggaatta
tttagtgcaaataaaaggttggcagaactagaaaaacaaacctctgaattctgtgacaag
ggcgtgcaaacagagcaagaatctgaacagagtcaatctgaagtgattatttctagtgaa
gtagatatactaaaggagaaagtgaagtcactaaataaagaactccaggaaaccaatgat
aaattaaatgaggccaaacagttcaagaacagtcttcaagaaaagtgcattttgctagat
aagagacttcaagaaaaccaggttgatttggaggaaaagcaaagtcttagatattctata
aagaaattagaactccaagtggaaagtcaagagtctgaaatcaaactagaacaaaacaaa
acagaggctgaaaaaaatcaactaggcatcttgcaggtttcatatgataaacttaactca
gaatatcaggaactaaggattagagagattgaaaaagtttccaaagttgagtttaatgag
ctgcttgaaaagctggatgtatgtgaaaaggcacttgcaaaaaaacaatttgaaattgat
gaaatgagagaaatggacacaaaacacgaggaggataaagaaacaattgaacttcttcgt
gctcaggttgacgtgtactgtgcagatttccatgctgaaagatcagcaagagaaaacatt
catcaagagaaggagcagttagcaactcgtctggcatatatgatacaagaatatgaaaaa
ctgaaggaagaaatgatgggcaagcagtcaatagagcagctccagaggcgccatggtgcc
acaagcttattggatgccagtgagggtccttatttagtggcaagaggggcagccaacatg
gagcagccaagtattactgtgtatacatgtccaaaatgtaacctgactgttccagacatg
gatacgctgcagattcacgtcatggactgtatcacctaa

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