Xenopus laevis (African clawed frog): 496260
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Entry
496260 CDS
T01010
Symbol
polr2j.S, polr2j
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa S homeolog
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03020
RNA polymerase
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
496260 (polr2j.S)
09124 Replication and repair
03420 Nucleotide excision repair
496260 (polr2j.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
496260 (polr2j.S)
03400 DNA repair and recombination proteins [BR:
xla03400
]
496260 (polr2j.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
496260 (polr2j.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
496260 (polr2j.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
496260
NCBI-ProteinID:
NP_001088910
Xenbase:
XB-GENE-972017
UniProt:
Q5M778
A0A974HW26
LinkDB
All DBs
Position
2S:complement(86519990..86526498)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccgccagcatttgagtcttttctactgttcgagggtgaaaaaaagataaca
atcactaaggataccaaggtacctaatgcctgtttgtttacaatcaacaaggaagatcat
acaattggaaatatcattaagtcacagttgctgaaggatcctcaggtgttatttgcaggt
tacaaagtcccacatcctcttgagcataaaattgtcataagagttcagacaacaccagac
tacagccctcaagaggcatttaccaatgcaatcactgacttgattagtgagctttccctt
ttagaggaaagatttcgggttgctattaaagataagcaagaaggaattgaatga
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