Xenopus laevis (African clawed frog): 496291
Help
Entry
496291 CDS
T01010
Symbol
rprd1b.S, rprd1a, rprd1a.S, rprd1bb
Name
(RefSeq) regulation of nuclear pre-mRNA domain containing 1B S homeolog
KO
K15559
regulator of Ty1 transposition protein 103
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
496291 (rprd1b.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
496291 (rprd1b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
FmiP_Thoc5
CTK3
FemAB
Motif
Other DBs
NCBI-GeneID:
496291
NCBI-ProteinID:
NP_001088920
Xenbase:
XB-GENE-949989
UniProt:
Q0D258
LinkDB
All DBs
Position
9_10S:complement(33234701..33266903)
Genome browser
AA seq
325 aa
AA seq
DB search
MASFTEPALEKKLSELSNSQQSVQTLSLWLIHHRKHAATIVTVWQKELRKAKTSRKLTFL
YLANDVIQNSKRKGPEFTREFENVLLDAFSHVSGEAEDGCRKPLERLLHIWQERGVYTSD
FIQQLRLAIDNDDSPKEAPVNEEKSLKRTFQQIQEEDDDYPGSYSPQETSSGPLLTEDLV
KALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYN
GRLAAELDDRKQLAKMLMEYTQTQKDVLGNKEKKLEEYKHKLARVTQVRKELKSHIQSLP
DLSLLPNVTGGLAPLPSAGDLFSTE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatttaccgaaccggccctggaaaagaagctgtcggagctgagcaactcgcag
caaagtgtccagacgttgtcgctgtggctgatccatcaccgaaaacacgcggcgactata
gtgacggtctggcagaaggaactcaggaaagccaagacaagccggaagctgactttcttg
tacttggccaatgatgttatccagaacagcaagcgcaaaggaccagagttcactcgcgag
tttgagaatgtgcttttggatgccttttcacatgtgtctggcgaggcagaggacgggtgc
cggaagcccttggaaaggttgctgcacatctggcaggaacgcggtgtttacacctctgat
tttattcaacagctcagactggcaattgataatgatgacagccccaaggaagcaccagtc
aatgaggagaaatcgttgaaacgcacctttcagcaaatacaagaggaagatgatgattat
ccgggcagctactcaccacaggaaacttcctctggaccccttttgacagaagacctggtc
aaagctctgcaagatctggagaatgctgcgtccggagatgctgccgttaggcagaagatt
gcatccctcccacaggaagtgcaagatgtctccttgctggaaaaaatcacagataaggag
gcagcagagcgtctctcaaagactgtggacgaggcttgcctgttactagctgagtataat
gggaggcttgcagcagaactagatgatcgcaagcagttggcaaagatgctgatggagtac
acacagacccagaaggacgttctcggcaacaaggagaagaagctagaggaatacaagcac
aaacttgcacgggtaacgcaagttcggaaagaactgaaatcgcacatacagagcctccca
gacctctcgctgcttccgaatgtcactggggggctcgcacctctcccctctgccggggac
cttttctcaactgaatga
DBGET
integrated database retrieval system
