KEGG   Xenopus laevis (African clawed frog): 496306
Entry
496306            CDS       T01010                                 
Symbol
phf5a.L
Name
(RefSeq) PHD finger protein 5A L homeolog isoform X1
  KO
K12834  PHD finger-like domain-containing protein 5A
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    496306 (phf5a.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    496306 (phf5a.L)
Spliceosome [BR:xla03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    496306 (phf5a.L)
 Complex B
    496306 (phf5a.L)
 Complex C
   U2 SnRNP specific factors
    496306 (phf5a.L)
SSDB
Motif
Pfam: PHF5
Other DBs
NCBI-GeneID: 496306
NCBI-ProteinID: XP_041446644
Xenbase: XB-GENE-976805
UniProt: A0A8J1MXP4
LinkDB
Position
4L:118138351..118143606
AA seq 128 aa
MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVI
CGGPGVSDAYYCKECTIQEKDVSKGPLRCLPTLLGVRIQILYFNKLATQRFAFKGHIHLY
QKTERWLS
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcgaagcatcatccagatctgattttttgcagaaaacaggccggtgtggccattgga
agactctgtgaaaaatgtgatggcaagtgtgtaatttgtgactcctatgtgcgtccatgc
acccttgtgcgtatatgtgatgaatgcaactacggttcttaccaagggcgctgtgtgatt
tgcggagggccaggggtttcagatgcttattactgcaaagaatgcaccattcaggagaaa
gatgtaagtaaaggaccactacgatgtctgcctacgctgctgggagtaaggattcaaata
ttatactttaacaaactagctacacagagatttgcatttaaagggcatattcacctttat
cagaaaacagagagatggttgtcctaa

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