KEGG   Xenopus laevis (African clawed frog): 496335
Entry
496335            CDS       T01010                                 
Symbol
afdn.S
Name
(RefSeq) afadin isoform X1
  KO
K05702  afadin
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04520  Adherens junction
xla04530  Tight junction
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    496335 (afdn.S)
   04530 Tight junction
    496335 (afdn.S)
SSDB
Motif
Pfam: RA DIL PDZ FHA PDZ_6 PDZ_2 ASPP1-2_RA Yop-YscD_cpl HEF_HK
Other DBs
NCBI-GeneID: 496335
NCBI-ProteinID: XP_041420400
Xenbase: XB-GENE-17342250
UniProt: A0A8J1KSV9
LinkDB
Position
5S:44450170..44541720
AA seq 1902 aa
MSASREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPRYSLYEVHVSGEERKLDFEEKPLVVQLNWNKD
DREGRFVLKNENIFPLKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREREQSTDKE
EQSQLRDDGDNLQLAMEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRP
DSGGTLRIYADSLKPNIPYKTILLSTNDTADFAVIEALEKYGMEKENPKEYCIAKVILSP
GAQHSDKGIIEFILDDEECPLHIFRDWPNEKGELVFQLKRRPTDSILKQNRKHDGKSGKS
KDRTDHYSLSLSPDKLPYLVELSADGSDSRDKPKLYRLQPSVTEVGTEKFQDNSIQLFGP
GIQHHHCDLNNMDGVVTVTPRRIDADTYVDGHRISETTMLHSGVKVQFGSSHVFKFVDPN
LDHLLGKSLSDTGQIGKNQRTKQGLQETTFGLEGDVLGDVTTPANKMASKLDGERIPGMT
EKGMVKPMIRMDKQQDQRVQNGRSQDSQGPENVLPASIEFRENSEDAFLSAVINYTNSST
VHFKLSPTYVLYMTCRYVLSNKYRPDTSSAERTHKVIAVVNKMVGMMESVIQEIEKGNQK
QKNIAGALAFWMANASELLNFIKQDRDLNRITLDAQDVLAHLVQMAFKYLVHCLQSELTS
SMPAFIDDPEENDSQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFN
RLVTDPDSGLCSHYWGAIIRQQLAHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSH
QDIPNINNTCFKLNSLQLQALLQNYHCAPDEPYIPTELIDSVVSVAENTADELARSDGRE
VQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLEPLCQRGFCRLVPHSRSPGIWTIY
FEGADYENHLLTDNTDLPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQEKLGIYIKSVVK
GGAAEVDGRLAAGDQLISVDGQSLVGLSQERAAELMTRTGAVVTLEVAKQGAIYHGLATL
LNQPSPLMQRGDRRGSGKPRPKSEGFELYNNTSQNGSPDSPPAQWPEYTEPKKLPGDDKL
MKNRTDHRSSPNVANQPQSPGGKTTYSSSSTVKITSVSTGNLCTEEETAPARPEAYPIPT
QTYAREYFTFPTPKSQDRIGPAQNHWQGYDDKFQVQMGNNHAINNSAQQIAYSNEELRDN
LAFQPERGQVEPQMRKDVEHLERNLDAKETWFNQGSSMESSTSCQDLNNSKTHSTGSLSK
TGPGRWKTPISSQSSTVILPQPVRTDLPPPPPPPVHYGTEFEGLSIELPLPPPPSESQLG
LSANSQAAALERKKREEHQRWYEKEKARLEEERERKRREQERKLGQVRPQPPTIPPQPVL
PQSPPLIPPPNVVQVRTEKPATLPRQQETVIRELQPQQQPRTIERRDLQYITVSKEELSS
SDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEINELQSKPDRTSEENDRLRKLMLEWQFQ
KRLQESQQKDDDDDDDEDDDDVDTLLIMQRLEAERKARQTAMPAISILYLLQDEERRRQQ
HLEEVRKREAEDRLRQEEEHRHQEEERARREAEEKRRQEEEYYNRLELERRRIHDEAERR
LLEPEEPGLYRPPLPREYELSNPTLSPNPPPPPPQRNTSYLKTQALSPDTVYTAKFVTYT
DDEEDTNLSGQDKYSSMRKSYGDLPPAAHKPQLPAARLPRPVSDGIFLSGSFQPPSANAN
STVSKTGPPIANKPSFLHYSSSKGPNSFSGSSGAAVSSNDVYKGPRDMRIKSQDEEAYGT
GGAPESLTFKERQRLFSQGQDVSNKVKASRKLMELENELNTK
NT seq 5709 nt   +upstreamnt  +downstreamnt
atgtcggcgagtcgagaagaggagcgccgcaaactggcagacatcattaaccactggaac
gccaaccggctcgacctgttcgagatcagccaacccaccgaggatctggagtttcatgga
gtcatgcgcttttactttcaagataaagcagctggaaatttcgccacaaaatgtattaga
gtttccagcactgccacaacacaagatgtcattgaaactctggcagagaagtttcgccca
gacatgagaatgctgtcttcccctagatactctttgtatgaagtacatgttagtggagaa
gaaagaaaacttgattttgaagagaagcctctggtagttcagctgaattggaataaggat
gatagggaaggaagatttgttctcaagaatgaaaacatctttccactaaaaaaggctcaa
agcaatggaccagagaaacaggaaaaagaaggtgtaatccagaattttaagaggaccttg
tcaaaaaaggaaaaaaaagagaagaaaagacgtgagagggagcagtcgacagataaagag
gagcagtcacagctgagagatgatggtgataacttacagttagctatggaggtatacaaa
gatatgccagagaccagctttactcgcacaatatctaacccagaggtggttatgaaaaga
agacgacagcaaaaattggaaaaaagaatgcaagaattccgcagctctgatggacgacca
gactcgggtgggacattgcggatttatgctgatagtttaaaaccaaatataccatacaaa
acaatcttgttatccactaatgatacagcagattttgccgttatagaagctttggaaaaa
tatggaatggagaaagaaaaccccaaggaatactgcattgctaaggtcatattatcacct
ggagctcagcattcagacaaaggcattatagaatttattctagatgatgaagaatgccct
cttcacatatttcgagattggccaaatgagaaaggggaacttgtgttccagttgaaaaga
cggccaacagatagtattctaaagcaaaaccggaaacatgacggcaaatcaggaaagagc
aaggacagaactgaccactattctttatcactttctcctgataaactgccttacttggtg
gagttaagtgcagatggatcagactcgagagataagcccaaactctatcgtttacaacca
agtgtcacggaagttggaactgaaaaatttcaggataattccatacagctgtttggccca
gggatacaacatcaccattgtgacctaaataatatggatggtgtagtcacagttactcca
agaagaattgatgctgatacgtatgtggatggtcatcgtatctcagagactactatgctg
cacagtggagtcaaggttcagttcggttcttcacacgtgttcaaatttgttgaccccaac
cttgatcacttactgggtaaaagcctttctgatactgggcaaattggtaaaaaccaaagg
accaaacaagggttgcaagaaactacatttggtcttgaaggtgatgttcttggtgatgtc
acaacgccagctaataagatggccagtaaactagacggtgagagaataccgggtatgaca
gagaaaggtatggtgaaaccaatgataagaatggacaagcagcaagatcaacgtgtgcaa
aacggcaggtctcaagattcccaaggaccagaaaatgtgttgcctgcaagtattgaattt
agagaaaattctgaagatgcctttttgtctgccgttattaactatacaaacagttctact
gtgcatttcaaactttcaccaacatatgtgctgtacatgacctgtcggtatgtattgtcc
aacaagtacagaccagatacaagttctgctgagcgaacacacaaagtaattgctgttgtg
aacaagatggtgggaatgatggaaagtgtaatccaggaaatagagaaaggtaaccagaag
caaaagaatattgctggggctctcgctttctggatggcaaacgcttcagagcttctcaat
ttcataaaacaagaccgagatctcaatcgtataacgttggatgcacaagatgttcttgca
catttagttcagatggcattcaaatacctggtgcactgtcttcagtctgaactgaccagc
tccatgcctgcttttatagatgatccagaagaaaatgattcccaaaggcccaaaatagaa
gatgtcttgcatactctgacaggtgccatgtcacttctaagacgttgccgggtcaacgca
gcactaactattcagctcttctcacagttattccatttcatcaacatgtggctgttcaac
aggcttgtaacagatccagactccggtttatgctctcactattggggggcaataatacgt
cagcagcttgcacacatagaggcctgggctgaaaaacaaggccttgaattggctgcagac
tgtcaccttagcagaatagttcaggctactacccttctcactatggataagtactcgcat
caagatattccaaatattaataatacatgttttaagctgaactccttacaattgcaagct
cttcttcaaaattaccactgtgctcctgatgaaccatacattccaacagagttgatagac
agtgtagtatctgtagcagaaaatactgctgatgaattggctcgaagtgatggcagagaa
gtccaactggaggaggatccggatctgcagctacctttccttttgcctgaagatggttat
tcatgtgatgttgttaggaacattcctaatggccttcaggagtttctagaacctctctgt
cagagaggtttctgcagacttgtccctcactcgcgttcaccaggcatatggacaatttac
tttgaaggagcggactatgaaaatcatttgttgacagacaatacagacctgccattaaga
aaggaacctgaaataatcactgtgacacttaaaaagcaaaatggaatgggtttgagtatt
gttgctgcaaagggtgcaggacaagaaaaacttgggatttacattaaatctgtggtgaaa
ggtggtgctgcagaagtggatggccgtttagcagcaggggaccaacttataagtgtggat
gggcaaagtttagtgggtttgtcccaagaaagagctgcggagcttatgactagaactggg
gctgtagtaacccttgaggtagcaaagcaaggagcaatataccatggacttgccacacta
ctaaaccaaccatctcctcttatgcaaagaggagatcgacgtggctcaggaaaaccacgg
ccaaagagtgaaggttttgagctttacaataacacttcccagaatggttctcctgatagc
cctccggcacaatggcctgaatacacagaacccaagaagttaccaggggatgataaacta
atgaaaaaccgtactgatcatcgctccagtcctaatgtagccaatcaacctcagagtccg
ggtggaaaaacaacttattcaagcagctctactgtgaagatcacgtctgtctccacagga
aatttatgcactgaggaagagactgcaccagcaagaccagaagcttatcctatcccaacg
caaacatatgcaagggagtattttacttttccaactcccaaatctcaagatcgaatagga
cctgctcagaaccactggcaaggctatgatgataaatttcaagttcagatggggaacaac
catgctataaataattcagctcaacaaattgcttattctaatgaagaactgagggataat
ttggcatttcagccagaaagaggacaagtcgaaccccagatgcggaaagatgtggaacat
ttggaacgaaatctggatgctaaagaaacttggttcaatcaaggctcttctatggaatca
agtacatcttgtcaagaccttaataactctaagacacattctacaggctctttgagcaaa
acaggacctggtcgctggaaaacgccaatttcttctcaatcatctactgttattttgccc
caacctgttagaacagaccttcctcctccaccacctccaccagttcattatggaacagaa
ttcgaggggctgtctatagaattacctctaccacccccaccatctgaaagccaactagga
ctttctgcaaattcacaggcagctgcattagaaagaaagaagagggaagaacatcagagg
tggtatgagaaagagaaggcacgtttggaagaagaaagagagcggaaaaggcgagagcag
gaaagaaagctaggtcaggttcgtcctcagccaccaactatacctcctcaaccagtactt
ccacagtctcctccattgattcctcctccaaatgttgtacaagtcagaacagaaaaacct
gctactcttcctcggcaacaagagactgttatcagggagcttcaacctcagcaacagcca
cggaccatagaaagaagagatctccagtacattactgtcagcaaagaagagctctcttcc
agtgacagtctttccccagatccctggaagagggatgccaaagagaagctagaaaaacag
cagcaaatgcatattgtggatatgctaagcaaagagataaatgaactgcaaagcaagccc
gaccgaacttctgaagaaaatgaccggctccgcaaattaatgcttgaatggcagtttcag
aagagactacaagagtcccagcagaaggacgatgatgatgatgacgatgaagatgatgat
gatgtggataccttgcttatcatgcagcgcctggaagctgaaagaaaagcaaggcagacc
gctatgccagcaatctctattctatatttgttacaggatgaagaacggagacggcaacaa
catttggaagaggtgcgcaaacgggaggcagaagatcgccttaggcaggaagaagagcat
cgtcatcaagaggaggagcgggcaaggagagaggctgaagaaaagaggagacaggaagaa
gagtactacaatcgattggaactcgaaaggcgtaggattcatgacgaagcagagcggcga
ttgctggagcctgaagagcctggtctgtacagacctccactcccacgggaatatgagctt
tctaacccaaccctctcgcctaatcctccgcctccccctcctcagcgtaacacctcttac
ctcaaaacacaagccctttccccagacacagtttacactgccaagtttgttacatacact
gatgatgaggaagacacaaacctatcaggtcaggataagtactccagcatgagaaaatca
tatggtgacctccctccagctgctcataaaccacagctgcctgctgcacggctgcctcgt
cctgtgtccgatggcatctttctttccggctcatttcagcccccttcagccaatgccaac
agtactgtttccaaaacgggtccacctatagcaaataaaccaagtttcctccattacagc
agctcaaaaggaccaaattctttttctggatcatctggtgcagcagtttctagtaatgac
gtttataaaggtccaagggatatgcgaattaaaagccaagatgaagaagcttatggtact
ggtggagccccagagagcctgacctttaaggagcgccagcgtctcttctctcagggccag
gatgtgtctaacaaagtaaaagcttccagaaaattaatggaactggaaaacgagttaaat
acaaaatga

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