KEGG   Xenopus laevis (African clawed frog): 496351
Entry
496351            CDS       T01010                                 
Symbol
kdm3a.S, jhdm2a, jhmd2a, jmjd1, jmjd1a, kdm3a, kdm3a-a, kdm3a-b, tsga
Name
(RefSeq) lysine-specific demethylase 3A-B
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    496351 (kdm3a.S)
Enzymes [BR:xla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     496351 (kdm3a.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    496351 (kdm3a.S)
SSDB
Motif
Pfam: DUF7030 JmjC PWWP_KDM3B Tudor_KDM3B Cupin_2 zf-UDP C1_2
Other DBs
NCBI-GeneID: 496351
NCBI-ProteinID: NP_001088971
Xenbase: XB-GENE-1012805
UniProt: Q5HZN1
LinkDB
Position
1S:complement(9692356..9738125)
AA seq 1334 aa
MVLTQQENLSVLVGQRFVCLLGKDLQVDPDTVSKWPWKSGIVRAASHKDLHCPEIKIFVE
YDDESWENRTWLELYGPTVKMFLVEHNLVLADHASPSNPSVSVQCPAMVYKVLVGKFSLG
STACLQFLGEKDKVFLSKELVKPVRDRETLKQFMQDNKTFNKAFQELIRKSVDESRLLQA
ARNIISMPINVYSMDPSMQWFSGTITNVRTASRALEIKCEQLPSLKIIDPALLHVVLVHN
YGDQNDKSKKPRASKRKSQDTESEDQTEVKQTRNEEVPSKDVTQKTSFLTYRRDDGKTLV
VVDNPKATTNNLFNYMTPATEDQQKVQQSLSSKQSVPVGFGETLLGCAATTPGIQNAATP
PPANSPPSFGAATPQGKGSQNLPGDTTVLNGDANREETNLFLSAAASQGNKRSMGFGIME
SPSTFSSLSTMPSWSGQPNSENGLKSENLFAAFTKSSTVFPKGFEFSVKSFPEQKMLSVT
DSPKTALQKTCVPQQEQNVIRKPENNHTSVKAIKPQEPPYTKSPNKTDGVTYPKSILLNP
QKLKRLQQSGDCFVQDGSCNNIAPHLHKCRECRLDRFGRSREQRDSAVFCRFFHFRRLHF
NKHGMLKEGGFLTPNKYDAEAINLWLPLASSVVDLDLDTAKYILANIGDHFCKLVMSEKE
VMSSTDPSKQVAWKRAVRGVREMCDACDTTIFNLHWVCPKCGFGVCVDCYRMRKKSLSSG
EEGNEMFSWLKCMKGQLHEPENLMPTQIVPGKALYDVCDIVHSVRGRWGIKSNCSCSNKH
MRPVSKPVVKEEVKPSTPEPEPIKSLLAQPNVCTVPDPPAIPNKPPTPACSSPLSWLTNF
PQTIVNKENKDNLFASTSKSEHKPLPSFASFGKPVSALQTFGSSILTPTTSNNSGFLRNL
LNASTLKQETSDKSTPKILDDIFASLVQSRPLSDFDRKPQGLPIQPSLMGFNTPHYWLCD
NRLLCLQDPNNKSNWNVFRECWKQGQPVMVSGVHNNLNSELWRPESFRREFGDQEADLVN
CRTNDIITGATVGDFWDGFEDIPGRLKNDTGESMVLKLKDWPPGEDFRDTMLSRFEDLMN
NIPLPEYTRREGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAA
NVMVYVGIPKGEHDQDQEVLRTIQDGDADELTIKRFIEFKEKPGALWHIYAAKDTEKIRQ
FLKKVAEEEGHENPPDHDPIHDQSWYLDNILRKRLLQEHGVQGWAIVQFLGDAVFIPAGA
PHQVHNLYSCIKVAEDFVSPEHVKHCFCLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDS
IAILKANESSLGKL
NT seq 4005 nt   +upstreamnt  +downstreamnt
atggtgctcactcagcaagagaacttgagtgtcctcgtgggtcagcgctttgtgtgcctc
cttgggaaggatttgcaggtggacccggacactgtttctaaatggccctggaaaagcggg
attgtccgagccgcttcgcataaggatcttcactgccctgagataaagatatttgtggaa
tatgatgatgagtcgtgggaaaacagaacatggctagaattatacggccctacagttaag
atgtttctagtagagcacaatttggtactggcagaccatgcgtccccaagcaatccttca
gtctctgttcagtgcccggccatggtttataaagtcctggtgggaaaattctctctggga
tcaacagcctgcttacagtttcttggagagaaagacaaagtgttcctttctaaagagctg
gtgaaacctgttcgggatcgtgagactttaaagcagtttatgcaagacaacaaaacgttt
aacaaagctttccaagaactcataagaaaaagtgtggacgaaagccgcttactccaagct
gcaagaaatatcatcagtatgcctataaacgtctatagcatggatccctcgatgcagtgg
ttcagtggaaccatcactaatgtacgaactgcttcgcgggcattggagataaagtgtgaa
cagttaccatcgttaaagattattgaccctgctctgttacatgttgtccttgtgcataat
tatggagaccaaaatgataaatccaagaaacctcgagcgtctaaaagaaagtctcaggat
acagagtctgaggatcagactgaagtaaaacaaactcgtaatgaagaggtgcctagtaag
gatgttacacagaaaacaagctttcttacataccgtagagatgatggaaaaacattagtt
gtggttgacaacccaaaagcaacaacaaataacctattcaactacatgactccagcaact
gaagatcagcaaaaggtacaacagagtctgtcttccaagcagtctgtcccagttggattt
ggagaaacattgttggggtgcgctgctacaacaccaggcatccaaaatgctgcaactcct
cctccggccaactctcctccaagctttggtgcagcaacacctcaagggaaaggctcccag
aatttgccaggagatactacagtgttgaatggtgatgcaaacagagaggagaccaatttg
ttcctgagcgctgcagcctctcagggcaataagaggagcatgggttttgggatcatggaa
agccccagtactttttcatcattatctacgatgccttcatggtctggccaaccaaacagt
gaaaatggcctcaagtcagagaacctttttgctgcatttacaaagtcgtcaacagtcttt
ccaaagggctttgagttttccgtgaagagtttcccggaacaaaagatgctctccgtaaca
gattctcctaaaactgcactgcagaagacctgcgtgccgcagcaagagcaaaatgtcatt
aggaaaccagagaacaatcataccagtgtgaaagccattaaaccccaagagccaccttat
acaaagagcccaaacaaaactgatggtgtaacttaccccaaatctatcctgctgaatcca
caaaagctgaaaaggctgcagcagagcggggattgctttgtgcaggacggctcttgcaac
aacattgcgcctcatcttcacaagtgcagggaatgccgtctggaccgatttggccgaagc
agggagcagcgggactctgccgtattctgcaggttcttccatttccgaaggttgcacttc
aacaaacatggcatgctaaaggaaggaggcttcctgactcccaataaatacgatgcagaa
gcaataaatctgtggctcccactggcaagcagcgttgtggaccttgatctcgatacagca
aagtacatcctggctaatattggagatcacttctgcaaactagtcatgtccgaaaaagaa
gtgatgtcttccactgatccatcaaaacaagttgcctggaagagagcagtacgcggggtc
cgtgaaatgtgcgatgcctgcgacacaaccatattcaatcttcactgggtgtgccccaag
tgtggctttggtgtgtgtgtagactgctataggatgaggaagaaaagtttaagcagtggc
gaggaaggaaatgaaatgttctcatggctgaagtgtatgaagggccaattacatgaacca
gaaaacctaatgccaacacagattgttcctggcaaagctctttatgatgtatgtgatatt
gtccattctgtgaggggaagatggggaataaagtccaactgttcatgttccaacaagcac
atgcggccggtatctaagcctgttgtaaaagaagaagtaaaaccgagcactcctgaacca
gagcccataaagtctctccttgcacagcccaatgtatgcactgtacctgatccaccagcc
attcctaataaacctcctacacctgcctgctctagtccattaagttggctgacaaacttt
ccacagacaattgtaaacaaagaaaataaagataatctatttgcttccacttctaaatcc
gaacacaaaccactcccatcatttgccagcttcggaaagcctgtatccgcccttcaaaca
tttggctcctcaattctgacgccaacaaccagcaataactccggttttttacggaatctc
ctcaatgcttccactttaaagcaagaaacaagtgacaaaagcacccctaaaatactcgac
gacatatttgcttcccttgtacaatcaaggccattgtctgattttgatagaaaaccacag
gggcttccaatccagcccagcttgatgggatttaataccccacactactggctgtgtgat
aaccgattgctgtgcctgcaagatcccaacaacaagagcaactggaatgtatttagagag
tgctggaaacagggccagcctgtgatggtatctggggtccacaataatttgaattcagaa
ctatggaggccagaatcctttagaagggaatttggtgatcaggaagctgacctggtgaat
tgccggaccaatgacattatcaccggagcaactgttggagatttctgggatggctttgaa
gacattccaggtcgtctaaaaaacgatacaggagaatccatggtgctgaaactgaaagac
tggcctcctggggaagatttcagggacacgatgctctcccgctttgaggacctgatgaac
aacatcccactgcccgaatacaccaggagggagggcaaactgaacctcgcagcaagactt
ccaacctattttgtgcgaccagatcttgggcccaaaatgtacaatgcatacggcttaatt
acaccagaggacagaaagtacggtacaactaaccttcacctggatgtgtctgatgctgcc
aacgtcatggtatacgtgggaattcctaagggggagcatgaccaggatcaagaagtgctc
aggacaatacaagatggcgacgccgatgagctgaccatcaagcgattcattgagttcaag
gagaaacccggggctctgtggcacatatatgctgctaaggacactgaaaaaatccgccag
tttctcaaaaaggtggcagaagaagaggggcatgaaaaccctcctgatcacgaccccatt
catgatcagagctggtacctggacaatatactgaggaagcggctgctgcaggagcacggg
gttcaaggatgggccattgtacagttcttgggagatgccgtattcatccccgcgggggcg
ccacaccaggttcacaatttatacagttgcattaaagtagcagaagactttgtatcccca
gagcatgtgaagcactgcttctgtctgactcaggaatttcgctacctttcccatacacac
acaaaccacgaggacaagttgcaggtaaagaatgtaatctatcatgcggtgaaggactcc
atcgcaatcctgaaagctaatgaatccagtctggggaaactttaa

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