Xenopus laevis (African clawed frog): 496354
Help
Entry
496354 CDS
T01010
Symbol
elp3.L, elp3
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
496354 (elp3.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
496354 (elp3.L)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
496354 (elp3.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-GeneID:
496354
NCBI-ProteinID:
NP_001088974
Xenbase:
XB-GENE-957353
UniProt:
Q5HZM6
A0A974HKT3
LinkDB
All DBs
Position
5L:<163926816..163991013
Genome browser
AA seq
549 aa
AA seq
DB search
MKPDRGMRGNMSQAELMMMTVADVIKQLVEAHEQGKDVNLNKLKTKTSAKYGLSAQPRLV
DIIAAVPPQYRKILVPKLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPDS
DFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHNVDKVEFIVMGGTFMALP
EDYRDFFIRNLHDALSGHTSNSVSEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLCY
GCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHLSKDAGFKVVSHMMPDLPNMGLERDI
EQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRYRSYSPSTLVDLVARILALVPP
WTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTECRDVRTREVGIQEIHHKVRPY
QVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRKCSEESFRPELKGGVSIVRELHVY
GSVVPISSRDPSKFQHQGFGMLLMEEAERIARDEHGSWKIAVISGVGTRNYYRKIGYELE
GPYMVKRLD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggacagagggatgagggggaacatgagtcaggccgagctgatgatgatgacg
gtggctgatgtcattaagcagctggtggaggctcatgagcaggggaaggacgtcaatctg
aacaagttaaaaacaaaaacttcagccaagtacggcctctctgcgcagcctcgcctggtg
gatattatcgccgccgtcccccctcagtaccggaaaatactggtgcccaagttaaaagca
aagccaatcagaactgccagcgggatcgctgtggtcgctgttatgtgtaaaccccacaga
tgcccccacattaatttcactggcaacatctgcgtgtactgccccggggggcctgattct
gactttgaatactcgacacaatcatatacaggatacgagccaacatcaatgagagccatc
cgtgctcggtacgacccctatctacagaccagacatcgagtggaacagctgaagcaattg
ggccacaacgtggacaaggtggagtttattgttatgggcggaacgttcatggccctacct
gaggattacagagacttcttcatccggaatctgcacgatgccttgtctggtcacacgtcc
aacagcgtctcggaggcagtccgatattctgaaaggagcaataccaagtgtgtgggcatc
accattgaaaccaggccagattattgcctcaagcgccacctgagtgacatgttgtgctac
ggttgcaccagacttgagatcggagtgcaaagtgtgtatgaagatgtggccagagataca
aacaggggccacacagtgaaagccgtttgcgagtccttccacctgtccaaagacgcggga
tttaaagtggtttcccacatgatgccagacctgcccaacatgggactggagagagacatt
gagcagtttattgagttctttgaaaaccctgctttccgcccagatgggatgaagctgtat
ccaacattggtgatccgtggcactggtctttacgagctctggaaaacaggacgatatagg
agttactccccgagcaccctggtggatttggtggcaaggattttggcccttgtgccaccg
tggacacgagtttacagagtacagagggatataccaatgccactagtaagctctggggtg
gagcacggtaacctgagggaattggcattagccagaatgaaagatttgggcactgagtgt
cgggatgtaagaacacgagaagtgggaatccaagaaattcatcacaaagtcagaccctat
caggttgagttaattcgtagagattatgttgccaacggagggtgggagacatttttatct
tatgaagatcctgagcaagacatacttattggcctcctgcggctgaggaaatgttcagaa
gagtccttcaggcccgagctcaagggaggtgtctctattgtacgggaactccatgtatat
ggcagcgtggttcccatcagcagccgtgacccttctaagttccaacatcaggggtttggg
atgttgctgatggaggaagcagagcgcatagcaagagatgaacatggttcctggaaaatt
gctgttatttcaggtgtcgggacaaggaactattacagaaaaattggttatgaattagaa
gggccgtacatggtgaagagactggactga
DBGET
integrated database retrieval system
