Xenopus laevis (African clawed frog): 503671
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Entry
503671 CDS
T01010
Symbol
nup50.L, npap60, npap60l
Name
(RefSeq) uncharacterized protein LOC503671
KO
K14295
nuclear pore complex protein Nup50
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
503671 (nup50.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
503671 (nup50.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
503671 (nup50.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
O-antigen_lig
Motif
Other DBs
NCBI-GeneID:
503671
NCBI-ProteinID:
NP_001089029
Xenbase:
XB-GENE-17342635
UniProt:
Q6DEC7
A0A8J0Q358
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All DBs
Position
3L:complement(3272387..3280783)
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AA seq
440 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEEEDAGMFSVASQEVLKTRAIKKAKRRNAGNESESGGAFKG
FKGLFLVTGGSLSSFGNGSPAKPSEGLSNGTSTSLFINLKPQSKPTFGSAFTNRPLLGTA
EKSTNGEKPLSSSGAALSKPGNLEYNKQLTSLNCSVRDWIVKHVNANPLCDLTPIFKDYE
KHLSAIEQKYGASSESGSESDGAAQTKTIPNLSSGKTVSIATFSFGNKDKAPEAPTKTPP
DSKPQAAPTFNFGQKVDSSTLGLISSGGAPNFSFSIGAPSLFGKNNGSTASSSSSQESEP
SGKTEEKGEGEEEEEPPKEVIQEIKEDDAFYSKKCKLFYKKDNEFKEKGVGTLHLKPVEN
KKTQLLVRADTNLGNILLNILVQPSMPCSRTGKNNVMIVCVPNPPVDEKNPTVPVTLLVR
VKSAEDADQLHKILLEKKEV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgaattgcggataaagagctgacggaccggaactgggatcaggaggaagaa
gaggaggatgccggaatgttctctgtggcgagtcaggaggttctgaagacgagggcgata
aagaaagcgaagcggagaaacgcggggaatgagagtgaaagtggcggggcttttaaagga
tttaaaggtttattcctggtgactgggggctcactttcttcttttggaaatggctctccc
gcgaaaccatcggaaggtttgagtaacggaaccagtacatccctgttcattaatctgaag
cctcaaagcaagcccaccttcggttctgcctttaccaaccgccccttactcggcaccgca
gaaaaatcgaccaatggtgagaagcctctgtctagctctggcgcggcattaagcaaaccg
ggcaacctggagtacaacaagcagcttacgtctctgaactgctctgtgcgcgactggatt
gtgaaacacgtcaatgccaaccccctgtgtgacctcacccccatatttaaggactacgag
aaacatttgtctgccatagagcagaagtacggcgccagctcagaaagtgggtccgaaagt
gacggagctgctcaaaccaagaccattccaaacctttcctctgggaaaacagtttctata
gcaacgttctctttcgggaacaaagataaagcaccagaggcgccaaccaagacccctccg
gacagcaaaccccaagctgcacccacatttaactttggccaaaaagttgacagttccact
cttggtttaatcagttctggtggggcccccaacttctccttttccattggggcccccagc
ctctttggtaaaaacaacggcagtacagcgtcttcctcttcttcccaggagtccgagcca
agcggaaagactgaagagaaaggtgaaggggaggaggaagaggaaccccccaaagaagtt
atacaagaaataaaagaggacgatgccttctactccaaaaagtgcaagctcttctacaaa
aaggacaatgaatttaaagagaaaggtgtaggcacccttcatctgaaacccgtagagaac
aaaaagactcagctcttggtgcgcgccgatacaaacctgggcaacatcctcctgaatatc
ttggtgcagccgtccatgccgtgctccagaaccgggaagaacaacgtcatgatcgtttgt
gttccaaacccgcccgtcgatgagaagaacccgactgtccccgtgacgctgcttgtgagg
gtcaaatccgccgaggatgccgaccaactgcacaaaatccttctggagaaaaaagaagta
taa
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