Xenopus laevis (African clawed frog): 503675
Help
Entry
503675 CDS
T01010
Symbol
nup50.S, npap60, npap60l, nup50
Name
(RefSeq) nucleoporin 50kDa S homeolog
KO
K14295
nuclear pore complex protein Nup50
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
503675 (nup50.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
503675 (nup50.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
503675 (nup50.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
503675
NCBI-ProteinID:
NP_001089033
Xenbase:
XB-GENE-970400
UniProt:
Q6DCU3
A0A974D8F1
LinkDB
All DBs
Position
3S:complement(2000908..2006984)
Genome browser
AA seq
436 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEAEDAGMFSVASQEVLKTREIKKAKRRNAGSENEIGGAFKG
FKGLFPASGGSLPSFGNGSSVKPLEGLSNGTTASAFINLKPASESKPTFGSAFGSRPLLG
TASTNGEKPLSSTGATLTKPGNLEYSKHLTSLNCSVRDWIVKHVNANPLCDLTPIFKDYE
KHLSAIEQKYGASSDSGSESDGAAQTKTIPNLPSIKADSIATFSFGNRETAPTKTPPDSK
PQAAPTFNFGQKVDSSTLSLIGSGGAPSFSFSTGASSLFGKNNASTASSSSSQESEPSGK
TEEKGEGEEEEPPKVVIQEIKEDDAFYSKKCKLFYKKDNEFKEKGVGTLHLKPVEDKKTQ
LLVRADTNLGNILLNILVQPSMPCSRTGKNNVMIVCVPNPPIDEKNPTVPVTLLIRVKNA
QDADELHKILLEKKEV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgaattgcggacaaagagctgacggatcggaactgggatcaggaggaagaa
gcagaggatgccggaatgttctctgtggccagtcaggaggttctgaagacgagggagatc
aagaaagcgaagcggagaaatgcggggagtgagaatgaaattggcggagcttttaaaggg
tttaaaggtttattccctgcatctggcggctcccttccttcctttggaaatgggtcttcc
gtgaaaccattggaaggtttgagtaacggaactactgcgtccgcgttcatcaatctgaag
ccggcgtctgaaagcaagcccacctttggttctgcctttggaagccgccccttactcggc
acagcatcgaccaatggtgagaagcctctgtctagcactggtgccacgttaactaagcct
ggcaatctggagtacagcaagcaccttacatctctgaattgctctgtgcgggactggatt
gtgaaacacgtcaatgccaaccccttgtgtgacctcacccccatatttaaggactatgag
aaacatttgtctgccatagagcagaagtacggtgccagctcagacagcggttctgaaagt
gatggggctgctcaaaccaagaccattccaaaccttccctctataaaagcagattctata
gcaacgttctctttcggaaacagagagacagcaccaaccaagacccctccagacagcaaa
cctcaagctgcgcccacctttaactttggccagaaagttgacagttccactcttagttta
attggttctggtggggcccccagcttctccttttccacaggggcctccagcctctttggt
aaaaacaacgccagtacggcgtcttcctcttcttcccaggagtcggagccaagcggaaag
actgaggagaaaggtgaaggggaagaagaagaaccccccaaagtagttatacaagaaata
aaagaggatgatgccttctactccaaaaagtgcaagctcttctacaaaaaggacaatgaa
ttcaaagagaaaggtgtaggtacccttcatctgaaacccgtagaggacaaaaagacacag
ctcttggtgcgagctgatacaaacctgggcaacatcctcttgaatatcttggtgcagccg
tccatgccgtgctccagaaccgggaagaacaacgtcatgatagtgtgtgtcccaaacccg
cccatcgacgagaagaaccccaccgtccccgtaacgctgttaatacgggtgaaaaacgca
caggacgcagacgaactacacaaaatcctgctggagaaaaaagaagtataa
DBGET
integrated database retrieval system