KEGG   Xenopus laevis (African clawed frog): 503675
Entry
503675            CDS       T01010                                 
Symbol
nup50.S, npap60, npap60l, nup50
Name
(RefSeq) nucleoporin 50kDa S homeolog
  KO
K14295  nuclear pore complex protein Nup50
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    503675 (nup50.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    503675 (nup50.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     503675 (nup50.S)
SSDB
Motif
Pfam: NUP50 Ran_BP1
Other DBs
NCBI-GeneID: 503675
NCBI-ProteinID: NP_001089033
Xenbase: XB-GENE-970400
UniProt: Q6DCU3 A0A974D8F1
LinkDB
Position
3S:complement(2000908..2006984)
AA seq 436 aa
MAKRIADKELTDRNWDQEEEAEDAGMFSVASQEVLKTREIKKAKRRNAGSENEIGGAFKG
FKGLFPASGGSLPSFGNGSSVKPLEGLSNGTTASAFINLKPASESKPTFGSAFGSRPLLG
TASTNGEKPLSSTGATLTKPGNLEYSKHLTSLNCSVRDWIVKHVNANPLCDLTPIFKDYE
KHLSAIEQKYGASSDSGSESDGAAQTKTIPNLPSIKADSIATFSFGNRETAPTKTPPDSK
PQAAPTFNFGQKVDSSTLSLIGSGGAPSFSFSTGASSLFGKNNASTASSSSSQESEPSGK
TEEKGEGEEEEPPKVVIQEIKEDDAFYSKKCKLFYKKDNEFKEKGVGTLHLKPVEDKKTQ
LLVRADTNLGNILLNILVQPSMPCSRTGKNNVMIVCVPNPPIDEKNPTVPVTLLIRVKNA
QDADELHKILLEKKEV
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggcgaaacgaattgcggacaaagagctgacggatcggaactgggatcaggaggaagaa
gcagaggatgccggaatgttctctgtggccagtcaggaggttctgaagacgagggagatc
aagaaagcgaagcggagaaatgcggggagtgagaatgaaattggcggagcttttaaaggg
tttaaaggtttattccctgcatctggcggctcccttccttcctttggaaatgggtcttcc
gtgaaaccattggaaggtttgagtaacggaactactgcgtccgcgttcatcaatctgaag
ccggcgtctgaaagcaagcccacctttggttctgcctttggaagccgccccttactcggc
acagcatcgaccaatggtgagaagcctctgtctagcactggtgccacgttaactaagcct
ggcaatctggagtacagcaagcaccttacatctctgaattgctctgtgcgggactggatt
gtgaaacacgtcaatgccaaccccttgtgtgacctcacccccatatttaaggactatgag
aaacatttgtctgccatagagcagaagtacggtgccagctcagacagcggttctgaaagt
gatggggctgctcaaaccaagaccattccaaaccttccctctataaaagcagattctata
gcaacgttctctttcggaaacagagagacagcaccaaccaagacccctccagacagcaaa
cctcaagctgcgcccacctttaactttggccagaaagttgacagttccactcttagttta
attggttctggtggggcccccagcttctccttttccacaggggcctccagcctctttggt
aaaaacaacgccagtacggcgtcttcctcttcttcccaggagtcggagccaagcggaaag
actgaggagaaaggtgaaggggaagaagaagaaccccccaaagtagttatacaagaaata
aaagaggatgatgccttctactccaaaaagtgcaagctcttctacaaaaaggacaatgaa
ttcaaagagaaaggtgtaggtacccttcatctgaaacccgtagaggacaaaaagacacag
ctcttggtgcgagctgatacaaacctgggcaacatcctcttgaatatcttggtgcagccg
tccatgccgtgctccagaaccgggaagaacaacgtcatgatagtgtgtgtcccaaacccg
cccatcgacgagaagaaccccaccgtccccgtaacgctgttaatacgggtgaaaaacgca
caggacgcagacgaactacacaaaatcctgctggagaaaaaagaagtataa

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